RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 EMC9Q9Y3B6 208 aa8.62□□□□□ -1.03
HDAC3-208ENST00000476739 FTCDNL1E5RQL4 147 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 LRRN3E7EW58 273 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 FMO6PO60774 539 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 DNAJC8O75937 253 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-208ENST00000476739 GGT1P19440 569 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 FKBP2P26885 142 aaKnown RBP8.61□□□□□ -1.03
HDAC3-208ENST00000476739 CCKARP32238 428 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 MSX2P35548 267 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-208ENST00000476739 KRTAP10-9P60411 292 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 SELENOWP63302 87 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 ROR2Q01974 943 aaKnown RBP8.61□□□□□ -1.03
HDAC3-208ENST00000476739 LTBQ06643 244 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 KRT72Q14CN4 511 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 EXOC3L2Q2M3D2 409 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 TMEM201Q5SNT2 666 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 EEF1A1P5Q5VTE0 462 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 TFAP2EQ6VUC0 442 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 LINC00114Q6XXX2 140 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 DEF8Q6ZN54 512 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 C22orf34Q6ZV56 151 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 DEFB107AQ8IZN7 70 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 PGAM4Q8N0Y7 254 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 SLC43A2Q8N370 569 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 STK35Q8TDR2 534 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 ADAMTS16Q8TE57 1224 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 DNAJA4Q8WW22 397 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-208ENST00000476739 RASSF5Q8WWW0 418 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 PROX1Q92786 737 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 TAAR8Q969N4 342 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 SLC25A36Q96CQ1 311 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 CDRT15Q96T59 188 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 KCTD14Q9BQ13 255 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-208ENST00000476739 PCDHAC1Q9H158 963 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 EVA1AQ9H8M9 152 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 C12orf10Q9HB07 376 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 ADPRHL2Q9NX46 363 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 CRIM1Q9NZV1 1036 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 KLHL9Q9P2J3 617 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 CD300AQ9UGN4 299 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 PRSS50Q9UI38 385 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 AP3M1Q9Y2T2 418 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 SNX13Q9Y5W8 968 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 ADGRG4Q8IZF6 3080 aa8.61□□□□□ -1.03
HDAC3-208ENST00000476739 IGKV3D-15A0A087WSY6 115 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 AQP7P3A6NL99 342 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 ZNF724A8MTY0 619 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 B2RBV5 119 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 GSTA4O15217 222 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 DNPH1O43598 174 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 ZNF682O95780 498 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SERPINA1P01009 418 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 GPIP06744 558 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 PNMTP11086 282 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 POU2F1P14859 743 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 TCN1P20061 433 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 CBLP22681 906 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 CD79BP40259 229 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 KIR2DL3P43628 341 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 YAP1P46937 504 aaKnown RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SLC16A1P53985 500 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 FOXD4Q12950 439 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 PIN1Q13526 163 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SLC17A1Q14916 467 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 PDK3Q15120 406 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 TSC22D1Q15714 1073 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 OTUD3Q5T2D3 398 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 GLYATQ6IB77 296 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 ZNF613Q6PF04 617 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 PAQR6Q6TCH4 344 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 RINLQ6ZS11 566 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 CBLL1Q75N03 491 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 GDF7Q7Z4P5 450 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 TSEN54Q7Z6J9 526 aaKnown RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 NKAIN4Q8IVV8 208 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 KDM8Q8N371 416 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 PIGXQ8TBF5 258 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 ZHX1-C8orf76Q96EF9 292 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SLC47A1Q96FL8 570 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 NSL1Q96IY1 281 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 MOGAT1Q96PD6 335 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 PRSS27Q9BQR3 290 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 NAA11Q9BSU3 229 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 AMBRA1Q9C0C7 1298 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 GP6Q9HCN6 339 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 FOXD3Q9UJU5 478 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 BAG5Q9UL15 447 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SLC7A7Q9UM01 511 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SLC9A8Q9Y2E8 581 aa8.6□□□□□ -1.03
HDAC3-208ENST00000476739 SETXQ7Z333 2677 aaKnown RBP8.6□□□□□ -1.03
HDAC3-208ENST00000476739 TRAPPC13A5PLN9 417 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 TUBAL3A6NHL2 446 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 J3KTA2 159 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 CHP2O43745 196 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 MGRN1O60291 552 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 EIF1BO60739 113 aaKnown RBP8.59□□□□□ -1.03
HDAC3-208ENST00000476739 AHSA1O95433 338 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 IFNA14P01570 189 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 IGHV3-9P01782 118 aa8.59□□□□□ -1.03
HDAC3-208ENST00000476739 BGLAPP02818 100 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms