RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 MST1P26927 711 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ELK4P28324 431 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 NOS3P29474 1203 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 CD96P40200 585 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 CLK1P49759 484 aaKnown RBP11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ARG2P78540 354 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 FOXF1Q12946 379 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 SELENBP1Q13228 472 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 SRSF6Q13247 344 aaKnown RBP11.08□□□□□ -0.64
MRPL55-227ENST00000475832 MFAP5Q13361 173 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 TOMM20Q15388 145 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 OR1C1Q15619 314 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF74Q16587 644 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 PGGHGQ32M88 737 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 FAM69AQ5T7M9 428 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ATP1A1-AS1Q5TC04 95 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF468Q5VIY5 522 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-227ENST00000475832 C1orf140Q5VVS0 124 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ARHGAP11AQ6P4F7 1023 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 CCDC81Q6ZN84 652 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 MDGA2Q7Z553 956 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ADGRG3Q86Y34 549 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 WDSUB1Q8N9V3 476 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 CNIH3Q8TBE1 160 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 LIPHQ8WWY8 451 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF566Q969W8 418 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 TNFRSF13CQ96RJ3 184 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 POTEKPQ9BYX7 375 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 TUBA8Q9NY65 449 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-227ENST00000475832 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-227ENST00000475832 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
MRPL55-227ENST00000475832 BOD1L1Q8NFC6 3051 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 BSNQ9UPA5 3926 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 TRAV27A0A087WT01 109 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 IRGMA1A4Y4 181 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 GJE1A6NN92 205 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 RIIAD1A6NNX1 92 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 C17orf51A8MQB3 221 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 SLC1A7O00341 560 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 IDH3BO43837 385 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 MRPS14O60783 128 aaKnown RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 PTP4A3O75365 173 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 TRIM3O75382 744 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 SMNDC1O75940 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 WDPCPO95876 746 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 CLPTM1O96005 669 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 IGFBP1P08833 259 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF17P17021 662 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 WT1P19544 449 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 PAICSP22234 425 aaKnown RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 SRD5A2P31213 254 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 IDUAP35475 653 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 RPS5P46782 204 aaKnown RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 ST13P50502 369 aaKnown RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 CCL11P51671 97 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 TUBA4AP68366 448 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 BLMHQ13867 455 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 CTU2Q2VPK5 515 aaKnown RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 DEFB109BQ30KR1 87 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 ARSKQ6UWY0 536 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 DPY19L2P2Q6ZN68 376 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 GTPBP8Q8N3Z3 284 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 IQCF1Q8N6M8 205 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 TCEANCQ8N8B7 351 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 TMEM178AQ8NBL3 297 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF540Q8NDQ6 660 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 TM9SF4Q92544 642 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 RFKQ969G6 155 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 MYDGFQ969H8 173 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 SLC25A36Q96CQ1 311 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 KTI12Q96EK9 354 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 PIGQQ9BRB3 760 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 PLA2G12AQ9BZM1 189 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 UBQLN3Q9H347 655 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 ZFP64Q9NPA5 681 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
MRPL55-227ENST00000475832 PCDHGB5Q9Y5G0 923 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 CORINQ9Y5Q5 1042 aa11.07□□□□□ -0.64
MRPL55-227ENST00000475832 EFCAB10A6NFE3 127 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 G3V3Y1 287 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 BLOC1S5-TXNDC5H3BN57 136 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 TLX2O43763 284 aaPredicted RBP11.06□□□□□ -0.64
MRPL55-227ENST00000475832 PEPDP12955 493 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 ZNF3P17036 446 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 CRHBPP24387 322 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 FMO3P31513 532 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 DNASE1L1P49184 302 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 LY6DQ14210 128 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 OCLNQ16625 522 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 ALG10Q5BKT4 473 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 SLC25A30Q5SVS4 291 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 RAET1LQ5VY80 246 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 SPINK14Q6IE38 97 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 SLC25A25Q6KCM7 469 aa11.06□□□□□ -0.64
MRPL55-227ENST00000475832 ACSM5Q6NUN0 579 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms