RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PRODHO43272 600 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 OR2T1O43869 369 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 TRIM3O75382 744 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 SLC2A10O95528 541 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 PEPDP12955 493 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF3P17036 446 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 ADH6P28332 368 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 NOS3P29474 1203 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 SLC15A1P46059 708 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 DSCR4P56555 118 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 MVKQ03426 396 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 LTBQ06643 244 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 CLN3Q13286 438 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 GXYLT1Q4G148 440 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 TIGD3Q6B0B8 471 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 C3orf33Q6P1S2 294 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 BCDIN3DQ7Z5W3 292 aaKnown RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 GID4Q8IVV7 300 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 ANKK1Q8NFD2 765 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 POC1BQ8TC44 478 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 SLC25A43Q8WUT9 341 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 JSRP1Q96MG2 331 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 ERMAPQ96PL5 475 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-210ENST00000475329 SIGLEC11Q96RL6 698 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 NPAS1Q99742 590 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 ASPNQ9BXN1 380 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 LRFN1Q9P244 771 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 KLHL21Q9UJP4 597 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 DKKL1Q9UK85 242 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 PCDHGB1Q9Y5G3 927 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 FREM3P0C091 2139 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 CEP250Q9BV73 2442 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TRABD2BA6NFA1 517 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SHISA8B8ZZ34 492 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 BLOC1S5-TXNDC5H3BN57 136 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 IDH3BO43837 385 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 STSP08842 583 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 PRKAR1AP10644 381 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TFPIP10646 304 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 PAICSP22234 425 aaKnown RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TCEA1P23193 301 aaKnown RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 DPP4P27487 766 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 IDUAP35475 653 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 CD96P40200 585 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 AQP2P41181 271 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 DNASE1L1P49184 302 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 CDH11P55287 796 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SOX8P57073 446 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 RPL18Q07020 188 aaKnown RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 ST3GAL4Q11206 333 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SELENBP1Q13228 472 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SRSF6Q13247 344 aaKnown RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TUBA3CQ13748 450 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 MFSD13AQ14CX5 517 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SGCBQ16585 318 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 ALG10Q5BKT4 473 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SLC35F1Q5T1Q4 408 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 AADACL4Q5VUY2 407 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 C1QL3Q5VWW1 255 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 NXNL2Q5VZ03 156 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 XAF1Q6GPH4 301 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TUBA3EQ6PEY2 450 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 GPR141Q7Z602 305 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 IGFN1Q86VF2 1251 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF227Q86WZ6 799 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 CPOQ8IVL8 374 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 OR5J2Q8NH18 312 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 MOSPD2Q8NHP6 518 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 SLC25A36Q96CQ1 311 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 DTNBP1Q96EV8 351 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TUBA1CQ9BQE3 449 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 TAPBPLQ9BX59 468 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 POTEKPQ9BYX7 375 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 NRIP3Q9NQ35 241 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 HINT3Q9NQE9 182 aaKnown RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 H2AFY2Q9P0M6 372 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-210ENST00000475329 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.41□□□□□ -0.422e-9■■■■■ 40.4
TRAF4-210ENST00000475329 IER3IP1Q9Y5U9 82 aa12.41□□□□□ -0.42
TRAF4-210ENST00000475329 DMXL1Q9Y485 3027 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 A0A1W2PRS3 328 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF891A8MT65 544 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 FTCDNL1E5RQL4 147 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 PRR23D1E9PI22 279 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 ARPC3O15145 178 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 NKX2-8O15522 239 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 CBR3O75828 277 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 CD14P08571 375 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 TSPAN19P0C672 248 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 PRR23D2P0DMB1 279 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
TRAF4-210ENST00000475329 CNR1P21554 472 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 PCMT1P22061 227 aa12.4□□□□□ -0.42
TRAF4-210ENST00000475329 GTF2E2P29084 291 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms