RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CECR9P0C854 216 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 IMPDH2P12268 514 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 IL2RGP31785 369 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 SH3BGRP55822 239 aaPredicted RBP10.93□□□□□ -0.66
SKA3-206ENST00000475251 GNA13Q14344 377 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 MAPK14Q16539 360 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 PGS1Q32NB8 556 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 UGT3A2Q3SY77 523 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 FAM174BQ3ZCQ3 159 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 XKR7Q5GH72 579 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 SWT1Q5T5J6 900 aaKnown RBP10.93□□□□□ -0.66
SKA3-206ENST00000475251 TMEM225Q6GV28 225 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 ANKRD16Q6P6B7 361 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 GPAT4Q86UL3 456 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 RIMKLAQ8IXN7 391 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 IFT20Q8IY31 132 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 KRTCAP2Q8N6L1 136 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 NOA1Q8NC60 698 aaKnown RBP10.93□□□□□ -0.66
SKA3-206ENST00000475251 XAGE5Q8WWM1 108 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 ROPN1LQ96C74 230 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 JMJD8Q96S16 334 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 C1orf50Q9BV19 199 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 TAPBPLQ9BX59 468 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 OSGIN1Q9UJX0 560 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 PRDM4Q9UKN5 801 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 GRIP1Q9Y3R0 1128 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 AQP7P3A6NL99 342 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 TMEM233B4DJY2 109 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 FAM157AC9JC47 383 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 FAAHO00519 579 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 RNASET2O00584 256 aaKnown RBP10.92□□□□□ -0.66
SKA3-206ENST00000475251 VENTXO95231 258 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 LGI1O95970 557 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 IGLV1-44P01699 117 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 OR12D1P0DN82 309 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 TACR3P29371 465 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 POU3F1Q03052 451 aaPredicted RBP10.92□□□□□ -0.66
SKA3-206ENST00000475251 RIN1Q13671 783 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 PCLAFQ15004 111 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 ADRM1Q16186 407 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 GPAT3Q53EU6 434 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 C6orf136Q5SQH8 315 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 SVOPLQ8N434 492 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 IL17RDQ8NFM7 739 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 OR4A15Q8NGL6 344 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 FAM216AQ8WUB2 273 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 ZNF385AQ96PM9 386 aaKnown RBP10.92□□□□□ -0.66
SKA3-206ENST00000475251 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
SKA3-206ENST00000475251 DOK1Q99704 481 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 RBM4Q9BWF3 364 aaKnown RBP10.92□□□□□ -0.66
SKA3-206ENST00000475251 DYSFO75923 2080 aa10.92□□□□□ -0.66
SKA3-206ENST00000475251 TMEM89A2RUT3 159 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 SCN2BO60939 215 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 BCAS1O75363 584 aaPredicted RBP10.91□□□□□ -0.66
SKA3-206ENST00000475251 SKAP2O75563 359 aaPredicted RBP10.91□□□□□ -0.66
SKA3-206ENST00000475251 AKR7A3O95154 331 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 IGKV3-15P01624 115 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CHRNGP07510 517 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 EGR1P18146 543 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 KRT4P19013 534 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 UQCRC2P22695 453 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CXCR1P25024 350 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 SERPINB5P36952 375 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 LIMS1P48059 325 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CLDN8P56748 225 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 IL1RL1Q01638 556 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 LGALS3BPQ08380 585 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CEACAM7Q14002 265 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CCNIQ14094 377 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 OR7A5Q15622 319 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 GSTA3Q16772 222 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 REP15Q6BDI9 236 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 FRRS1Q6ZNA5 592 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 USP43Q70EL4 1123 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 OLIG3Q7RTU3 272 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CLECL1Q8IZS7 167 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 TMEM99Q8N816 258 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 ZIC4Q8N9L1 334 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 CKAP2Q8WWK9 683 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 BCL2L2Q92843 193 aaPredicted RBP10.91□□□□□ -0.66
SKA3-206ENST00000475251 TMEM186Q96B77 213 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 TUBGCP3Q96CW5 907 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
SKA3-206ENST00000475251 GIMAP2Q9UG22 337 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 PCDHB10Q9UN67 800 aa10.91□□□□□ -0.66
SKA3-206ENST00000475251 NUP214P35658 2090 aaPredicted RBP10.91□□□□□ -0.66
SKA3-206ENST00000475251 CFAP73A6NFT4 308 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 LIPT2A6NK58 231 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 AP3D1O14617 1153 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 TFP02787 698 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 G6PDP11413 515 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 CBR1P16152 277 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 CREB1P16220 341 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 CALCRP30988 508 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 THBS4P35443 961 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 ARR3P36575 388 aa10.9□□□□□ -0.66
SKA3-206ENST00000475251 ANXA11P50995 505 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms