RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CHRNB3Q05901 458 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 KRTAP24-1Q3LI83 254 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 C9orf135Q5VTT2 229 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 MSANTD1Q6ZTZ1 278 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 C16orf62Q7Z3J2 963 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 ADGRG3Q86Y34 549 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 PIGXQ8TBF5 258 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 XAGE5Q8WWM1 108 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 SLC35G5Q96KT7 338 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 OR11A1Q9GZK7 315 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 ZNF350Q9GZX5 532 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 OR51I1Q9H343 314 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 SLC52A3Q9NQ40 469 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 EXD2Q9NVH0 621 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 BTNL2Q9UIR0 455 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 CAPN7Q9Y6W3 813 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 PMF1-BGLAPU3KQ54 211 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.7□□□□□ -0.221e-11■■■□□ 19.1
SRRT-209ENST00000474896 SLC22A2O15244 555 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 LMX1BO60663 402 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 LY6HO94772 140 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
SRRT-209ENST00000474896 OR12D1P0DN82 309 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 FKBP2P26885 142 aaKnown RBP13.69□□□□□ -0.22
SRRT-209ENST00000474896 APOBEC3AP31941 199 aaPredicted RBP13.69□□□□□ -0.22
SRRT-209ENST00000474896 MAGEA8P43361 318 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 CLK1P49759 484 aaKnown RBP13.69□□□□□ -0.22
SRRT-209ENST00000474896 SLC16A1P53985 500 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 LRRC74AQ0VAA2 488 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 OR4A15Q8NGL6 344 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 RMND5AQ9H871 391 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 FKRPQ9H9S5 495 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 UPB1Q9UBR1 384 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 MALT1Q9UDY8 824 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 PCDHGB4Q9UN71 923 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 SLC35A3Q9Y2D2 325 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
SRRT-209ENST00000474896 RNF103-CHMP3A0A140T963 221 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 PDLIM1O00151 329 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 DNPH1O43598 174 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 DCTN3O75935 186 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 CSF3P09919 207 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 ZNF16P17020 682 aaPredicted RBP13.68□□□□□ -0.22
SRRT-209ENST00000474896 MAPRE2Q15555 327 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 TYW3Q6IPR3 259 aaKnown RBP13.68□□□□□ -0.22
SRRT-209ENST00000474896 SLC2A7Q6PXP3 512 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 CASP12Q6UXS9 341 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 HMGN2P46Q86SG4 172 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 TSPEARQ8WU66 669 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 RAB8BQ92930 207 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 ITCHQ96J02 903 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 PANX1Q96RD7 426 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 AMBRA1Q9C0C7 1298 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 SLC17A5Q9NRA2 495 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 PARPBPQ9NWS1 579 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 TRAPPC4Q9Y296 219 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 WDR45Q9Y484 360 aa13.68□□□□□ -0.22
SRRT-209ENST00000474896 ANGPT2O15123 496 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 KIAA0513O60268 411 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 THBS2P35442 1172 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 CDKN2CP42773 168 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
SRRT-209ENST00000474896 KCNJ10P78508 379 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 H3F3AP84243 136 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 SRSF2Q01130 221 aaKnown RBP13.67□□□□□ -0.22
SRRT-209ENST00000474896 MST1LQ2TV78 715 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 TNFAIP8L2Q6P589 184 aaPredicted RBP13.67□□□□□ -0.22
SRRT-209ENST00000474896 LSRQ86X29 649 aaPredicted RBP13.67□□□□□ -0.22
SRRT-209ENST00000474896 TREML1Q86YW5 311 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 MIPOL1Q8TD10 442 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 GTF2H4Q92759 462 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 LRRC37BQ96QE4 947 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 SAP130Q9H0E3 1048 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 SLC7A10Q9NS82 523 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.67□□□□□ -0.22
SRRT-209ENST00000474896 AMDHD2Q9Y303 409 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 NDUFAF1Q9Y375 327 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 NBEAL1Q6ZS30 2694 aa13.67□□□□□ -0.22
SRRT-209ENST00000474896 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 CLDN24A6NM45 220 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 RFXANKO14593 260 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 AGR2O95994 175 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 GUSBP08236 651 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 SRD5A1P18405 259 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 GZMKP49863 264 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 PDLIM4P50479 330 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 SLC35A1P78382 337 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
SRRT-209ENST00000474896 GGTLC2Q14390 218 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms