RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CHTF8P0CG12 524 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 DBTP11182 482 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 ABOP16442 354 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 DESP17661 470 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 POLR2EP19388 210 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 ATP6V1B2P21281 511 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 ATP6V1C1P21283 382 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 DRD5P21918 477 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 ADSSP30520 456 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 SOX6P35712 828 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 LONP1P36776 959 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 RPL13AP40429 203 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 SLC26A3P40879 764 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 RGS4P49798 205 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 EFNB2P52799 333 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 CRYBB1P53674 252 aaPredicted RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 RAP1BP61224 184 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 ZNF763Q0D2J5 394 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 UNC119Q13432 240 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 EBI3Q14213 229 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 CYTH1Q15438 398 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 GGTA1PQ4G0N0 100 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 NADK2Q4G0N4 442 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 TP53I3Q53FA7 332 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 TSPO2Q5TGU0 170 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 PYHIN1Q6K0P9 492 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 PRSS41Q7RTY9 318 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 GRAMD2AQ8IUY3 354 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 ANKFN1Q8N957 763 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 MARCH1Q8TCQ1 289 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 TBX15Q96SF7 602 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 PELOQ9BRX2 385 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 RBKSQ9H477 322 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 TM9SF3Q9HD45 589 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 CYTL1Q9NRR1 136 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 UFSP2Q9NUQ7 469 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 IL36GQ9NZH8 169 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 STOX2Q9P2F5 926 aaPredicted RBP2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 PNPLA6Q8IY17 1366 aa2.05□□□□□ -2.08
ECHDC1-213ENST00000474240 IGLV4-60A0A075B6I1 120 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 PPIAL4EA0A075B759 164 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 A0A0G2JN53 185 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 LRP5LA4QPB2 252 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 K7EPI3 171 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 LAD1O00515 517 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 SLC31A2O15432 143 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 MAGEB3O15480 346 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 MED6O75586 246 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 WISP3O95389 354 aaPredicted RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 STAMBPO95630 424 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 UGT2B4P06133 528 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 PPIAL4FP0DN26 164 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 HSPA5P11021 654 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 TDGF1P13385 188 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 RPA2P15927 270 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 TBPP20226 339 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 MMP11P24347 488 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 CXCR2P25025 360 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 GCAP28676 217 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 FMO3P31513 532 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 RPS10P46783 165 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 GYG1P46976 350 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 GPM6AP51674 278 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 TDGF1P3P51864 188 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 ERVK-25P63136 954 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 TGFBR3Q03167 851 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 NCBP1Q09161 790 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 SNTB2Q13425 540 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 GGTLC2Q14390 218 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 GPNMBQ14956 572 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 USH1GQ495M9 461 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 LRRC10Q5BKY1 277 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 PIGGQ5H8A4 983 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 C1orf220Q5T0J3 134 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 MARCH8Q5T0T0 291 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 GPRC6AQ5T6X5 926 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 OR52E8Q6IFG1 317 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 KCNIP4Q6PIL6 250 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 Q6ZN92 141 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 ACP7Q6ZNF0 438 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 PEX26Q7Z412 305 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 SAXO1Q8IYX7 474 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 OR2L13Q8N349 312 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 NPBQ8NG41 125 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 OR1N2Q8NGR9 330 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 MCOLN3Q8TDD5 553 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 NDRG1Q92597 394 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 IL22RA2Q969J5 263 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 PELI1Q96FA3 418 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 FCRL1Q96LA6 429 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 CLCC1Q96S66 551 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 RIOK1Q9BRS2 568 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 VCXQ9H320 206 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 SIAEQ9HAT2 523 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 KCNIP1Q9NZI2 227 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 TMOD2Q9NZR1 351 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 SNX6Q9UNH7 406 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 MRPS33Q9Y291 106 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 SLC25A15Q9Y619 301 aa2.04□□□□□ -2.08
ECHDC1-213ENST00000474240 CHD4Q14839 1912 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms