RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SNTB1Q13884 538 aaKnown RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 FAM69AQ5T7M9 428 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 ABLIM2Q6H8Q1 611 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 GLYATQ6IB77 296 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 ZNF474Q6S9Z5 364 aaPredicted RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 NUFIP2Q7Z417 695 aaKnown RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 RBM45Q8IUH3 476 aaKnown RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 CCDC103Q8IW40 242 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 DEFB107AQ8IZN7 70 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 RNF148Q8N7C7 305 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 KTI12Q96EK9 354 aaPredicted RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 MPP4Q96JB8 637 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 WFDC6Q9BQY6 131 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 KLHL4Q9C0H6 718 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 GMPR2Q9P2T1 348 aaKnown RBP12.24□□□□□ -0.45
USF1-205ENST00000473969 EGFL7Q9UHF1 273 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 SLC7A7Q9UM01 511 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 COL12A1Q99715 3063 aa12.24□□□□□ -0.45
USF1-205ENST00000473969 IGKV3D-15A0A087WSY6 115 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 C16orf97H3BN30 126 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 TPST2O60704 377 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 NPIPB7O75200 414 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 MRPL33O75394 65 aaKnown RBP12.23□□□□□ -0.45
USF1-205ENST00000473969 IFNW1P05000 195 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 NCK1P16333 377 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 GGT1P19440 569 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 KLK2P20151 261 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 TNFRSF1BP20333 461 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 OR1E2P47887 323 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 CRYBA2P53672 197 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 IL1RL1Q01638 556 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 FAM27E3Q08E93 113 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 NPTX1Q15818 432 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 SPATS1Q496A3 300 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 IFI44LQ53G44 452 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 CBLL1Q75N03 491 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 TRPM8Q7Z2W7 1104 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 GPAT4Q86UL3 456 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 LURAP1LQ8IV03 231 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 TMEM99Q8N816 258 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 OR4D11Q8NGI4 311 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 FAM222BQ8WU58 562 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
USF1-205ENST00000473969 SLC41A3Q96GZ6 507 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 ZNF300Q96RE9 604 aaPredicted RBP12.23□□□□□ -0.45
USF1-205ENST00000473969 TMEM43Q9BTV4 400 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 SF3B5Q9BWJ5 86 aaKnown RBP12.23□□□□□ -0.45
USF1-205ENST00000473969 ASPNQ9BXN1 380 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 PCDHAC1Q9H158 963 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 MAGEL2Q9UJ55 1249 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 SAMD4AQ9UPU9 718 aaKnown RBP12.23□□□□□ -0.45
USF1-205ENST00000473969 RASD1Q9Y272 281 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 CACNA1CQ13936 2221 aa12.23□□□□□ -0.45
USF1-205ENST00000473969 MED12LQ86YW9 2145 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 UNC79Q9P2D8 2635 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 AQP7P3A6NL99 342 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 OR5F1O95221 314 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 HSD17B1P14061 328 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 NQO1P15559 274 aaKnown RBP12.22□□□□□ -0.45
USF1-205ENST00000473969 OR3A2P47893 321 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 PCYT1AP49585 367 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 SLC16A1P53985 500 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 H3F3AP84243 136 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 EGR4Q05215 589 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 FBXW10Q5XX13 1052 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 CYP4Z1Q86W10 505 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 P3H2Q8IVL5 708 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 ARHGAP24Q8N264 748 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 UBE2J2Q8N2K1 259 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 ACBD4Q8NC06 268 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 LINC01560Q8TB33 94 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 TAAR8Q969N4 342 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 C14orf79Q96F83 325 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 DACH2Q96NX9 599 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 CRIM1Q9NZV1 1036 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 FAM32AQ9Y421 112 aaKnown RBP12.22□□□□□ -0.45
USF1-205ENST00000473969 CORINQ9Y5Q5 1042 aa12.22□□□□□ -0.45
USF1-205ENST00000473969 UTP20O75691 2785 aaKnown RBP12.22□□□□□ -0.45
USF1-205ENST00000473969 INTS1Q8N201 2190 aaKnown RBP12.21□□□□□ -0.45
USF1-205ENST00000473969 SH3D21A4FU49 640 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 ZNF716A6NP11 495 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 STAMBPO95630 424 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 HIST1H2ABP04908 130 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 THRBP10828 461 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 EPXP11678 715 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 ZNF43P17038 809 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 CBLP22681 906 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 UGT2B10P36537 528 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 TLE4Q04727 773 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 ST3GAL3Q11203 375 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 FOXD4Q12950 439 aaPredicted RBP12.21□□□□□ -0.45
USF1-205ENST00000473969 PIN1Q13526 163 aaPredicted RBP12.21□□□□□ -0.45
USF1-205ENST00000473969 C1DQ13901 141 aaKnown RBP12.21□□□□□ -0.45
USF1-205ENST00000473969 SLC17A1Q14916 467 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 CASP12Q6UXS9 341 aa12.21□□□□□ -0.45
USF1-205ENST00000473969 TFAP2EQ6VUC0 442 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms