RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ANKFN1Q8N957 763 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 FNDC5Q8NAU1 212 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 MIPOL1Q8TD10 442 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 EPS8L3Q8TE67 593 aaKnown RBP10.9□□□□□ -0.66
TRAF4-209ENST00000473421 HPS1Q92902 700 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 MOAP1Q96BY2 351 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 PPP3R2Q96LZ3 170 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 C16orf45Q96MC5 204 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-209ENST00000473421 RAB1BQ9H0U4 201 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 RLIMQ9NVW2 624 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 ZDHHC2Q9UIJ5 367 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 METRNQ9UJH8 293 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 SLC35A3Q9Y2D2 325 aa10.9□□□□□ -0.66
TRAF4-209ENST00000473421 SPIN1Q9Y657 262 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-209ENST00000473421 DUXAA6NLW8 204 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 TMEM229AB2RXF0 380 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 COPEO14579 308 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 ZNF208O43345 1280 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 PDE5AO76074 875 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 CHEK2O96017 543 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 CHRM4P08173 479 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 IFNGR1P15260 489 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 COL8A2P25067 703 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 CCT5P48643 541 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 COMPP49747 757 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-209ENST00000473421 POLR2HP52434 150 aaKnown RBP10.89□□□□□ -0.67
TRAF4-209ENST00000473421 DVL1P1P54792 670 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-209ENST00000473421 SYPL1Q16563 259 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 ELFN2Q5R3F8 820 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 KLHL24Q6TFL4 600 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 SPATA21Q7Z572 469 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 GPAT4Q86UL3 456 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 KDM8Q8N371 416 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 ZNF540Q8NDQ6 660 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 OR4A15Q8NGL6 344 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 CLDND2Q8NHS1 167 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 UBASH3BQ8TF42 649 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 NAA11Q9BSU3 229 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-209ENST00000473421 EXOSC3Q9NQT5 275 aaKnown RBP10.89□□□□□ -0.67
TRAF4-209ENST00000473421 ATAD3AQ9NVI7 634 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 TMEM45AQ9NWC5 275 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 SEC14L4Q9UDX3 406 aa10.89□□□□□ -0.67
TRAF4-209ENST00000473421 IGHV2OR16-5A0A0B4J2B6 119 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 TMEM89A2RUT3 159 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 AQP7P3A6NL99 342 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 HMGN4O00479 90 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 EIF1BO60739 113 aaKnown RBP10.88□□□□□ -0.67
TRAF4-209ENST00000473421 LYPLA1O75608 230 aaPredicted RBP10.88□□□□□ -0.67
TRAF4-209ENST00000473421 SEC14L2O76054 403 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 CPSF4O95639 269 aaKnown RBP10.88□□□□□ -0.67
TRAF4-209ENST00000473421 AK1P00568 194 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 GKN3PP0CG01 181 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 TCN1P20061 433 aaPredicted RBP10.88□□□□□ -0.67
TRAF4-209ENST00000473421 NPR2P20594 1047 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 MAPK1P28482 360 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 RPL3P39023 403 aaKnown RBP10.88□□□□□ -0.67
TRAF4-209ENST00000473421 CLDN8P56748 225 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 ARF1P84077 181 aaKnown RBP10.88□□□□□ -0.67
TRAF4-209ENST00000473421 MAPK11Q15759 364 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 SAXO2Q658L1 398 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 BHLHB9Q6PI77 547 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 NUP37Q8NFH4 326 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 WDR60Q8WVS4 1066 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 DDIT4LQ96D03 193 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 PPP1R36Q96LQ0 422 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 SLC38A1Q9H2H9 487 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 NOX3Q9HBY0 568 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 HIF1ANQ9NWT6 349 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 ADPRHL2Q9NX46 363 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 TREM2Q9NZC2 230 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 PCDHGB4Q9UN71 923 aa10.88□□□□□ -0.67
TRAF4-209ENST00000473421 ARPC4-TTLL3A0A0A6YYG9 625 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 OR6C65A6NJZ3 312 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 NPHS1O60500 1241 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 IGKV3-15P01624 115 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 HPXP02790 462 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 PRG2P13727 222 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 ACAA2P42765 397 aaKnown RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 SLC1A3P43003 542 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 SEC24CP53992 1094 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 ACTG1P63261 375 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 IL1RL1Q01638 556 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 EPS8Q12929 822 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 GPAT3Q53EU6 434 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 NIPAL3Q6P499 406 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 PEG10Q86TG7 708 aaKnown RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 LRP11Q86VZ4 500 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 WDFY1Q8IWB7 410 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 CKAP2Q8WWK9 683 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 NEU4Q8WWR8 484 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 GCDHQ92947 438 aaPredicted RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 YIPF5Q969M3 257 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 TUBGCP3Q96CW5 907 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 PRPF18Q99633 342 aaKnown RBP10.87□□□□□ -0.67
TRAF4-209ENST00000473421 KCNS3Q9BQ31 491 aa10.87□□□□□ -0.67
TRAF4-209ENST00000473421 RACGAP1Q9H0H5 632 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms