RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 FAM86B1Q8N7N1 296 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 SMYD1Q8NB12 490 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 PAPD5Q8NDF8 572 aaKnown RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 GPR32P1Q8NGA4 272 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 OR6K3Q8NGY3 331 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 OR4C3Q8NH37 302 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 TMEM171Q8WVE6 324 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 SLC35B4Q969S0 331 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 ZG16BQ96DA0 208 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 ZC3HAV1LQ96H79 300 aaKnown RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 CXorf56Q9H5V9 222 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 PTGES2Q9H7Z7 377 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 HHATLQ9HCP6 504 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 S100A14Q9HCY8 104 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 IL1RAPQ9NPH3 570 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 SDHAF3Q9NRP4 125 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 ARMC1Q9NVT9 282 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 KCNE5Q9UJ90 142 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 SLC35A3Q9Y2D2 325 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 SLC9A8Q9Y2E8 581 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 AP4S1Q9Y587 144 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 V9GYQ6 96 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 DSCAMO60469 2012 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 IGLV3-32A0A0A0MS00 114 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 CENPVL1A0A0U1RR11 272 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 CDHR4A6H8M9 788 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 SERINC4A6NH21 518 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ALG1L2C9J202 215 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 H3BML4 177 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 SCO2O43819 266 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 TPST1O60507 370 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 AQP8O94778 261 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 LGI1O95970 557 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 SEMG1P04279 462 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 IFNW1P05000 195 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 FCGR1AP12314 374 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ITGA2P17301 1181 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 IL11P20809 199 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 MAGEA2P43356 314 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 NR1H2P55055 460 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 TMEM44Q2T9K0 475 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 MRPL2Q5T653 305 aaKnown RBP8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ANKRD34AQ69YU3 496 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF836Q6ZNA1 936 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF704Q6ZNC4 412 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-206ENST00000471037 PIWIL3Q7Z3Z3 882 aaKnown RBP8.09□□□□□ -1.11
SF3A1-206ENST00000471037 HMGN2P46Q86SG4 172 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 GGNQ86UU5 652 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 CARM1Q86X55 608 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 MISPQ8IVT2 679 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF440Q8IYI8 595 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF611Q8N823 705 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF614Q8N883 585 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 PYDC1Q8WXC3 89 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 SLCO4A1Q96BD0 722 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 C1GALT1C1Q96EU7 318 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 GMPPAQ96IJ6 420 aaPredicted RBP8.09□□□□□ -1.11
SF3A1-206ENST00000471037 SEPHS2Q99611 448 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ARHGDIGQ99819 225 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 TMEM204Q9BSN7 226 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
SF3A1-206ENST00000471037 CHID1Q9BWS9 393 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 TBL1XR1Q9BZK7 514 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 KLHL4Q9C0H6 718 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 OR10A4Q9H209 315 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 DCLRE1BQ9H816 532 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 MED11Q9P086 117 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 SH3GLB1Q9Y371 365 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 AP4B1Q9Y6B7 739 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 COL6A5A8TX70 2615 aa8.09□□□□□ -1.11
SF3A1-206ENST00000471037 ATRQ13535 2644 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 FBN1P35555 2871 aaKnown RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 H3BNX3 289 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 HS3ST1O14792 307 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 SS18L1O75177 396 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 KRT36O76013 467 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 CSTAP01040 98 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 FABP3P05413 133 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 UBL4AP11441 157 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF17P17021 662 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 ATP5J2P56134 94 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 RGS8P57771 180 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 VLDLRP98155 873 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 RCN1Q15293 331 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 NRF1Q16656 503 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 GLIPR1L2Q4G1C9 344 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 STAC2Q6ZMT1 411 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 ZDHHC21Q8IVQ6 265 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 CLIP4Q8N3C7 705 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 FAM71CQ8NEG0 241 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 OR5M1Q8NGP8 315 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 DUSP19Q8WTR2 217 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 ADGRG7Q96K78 797 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 C7orf34Q96L11 122 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 RSPO3Q9BXY4 272 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 RTN4RQ9BZR6 473 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 RNPEPL1Q9HAU8 725 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 FANCFQ9NPI8 374 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms