RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 WDR88Q6ZMY6 472 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 DEF8Q6ZN54 512 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 GALNTL5Q7Z4T8 443 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM179BQ7Z7N9 219 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ZDHHC21Q8IVQ6 265 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 GPALPP1Q8IXQ4 340 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 DND1Q8IYX4 353 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 RBMXL3Q8N7X1 1067 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 FADS6Q8N9I5 356 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 NUDT10Q8NFP7 164 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 OR2M3Q8NG83 312 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ADAMTS16Q8TE57 1224 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 OIT3Q8WWZ8 545 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 GEMIN6Q8WXD5 167 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 LZICQ8WZA0 190 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 PROX1Q92786 737 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 NUDT11Q96G61 164 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 SCMH1Q96GD3 660 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 AJUBAQ96IF1 538 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 MCHR1Q99705 422 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 UGT2B28Q9BY64 529 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 TRIM15Q9C019 465 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 LAT2Q9GZY6 243 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 DSN1Q9H410 356 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 PRORYQ9H606 182 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 MAGIXQ9H6Y5 334 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 EXOSC3Q9NQT5 275 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 BATF3Q9NR55 127 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 MAN2C1Q9NTJ4 1040 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 SACM1LQ9NTJ5 587 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ARMC1Q9NVT9 282 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 TUBA8Q9NY65 449 aaPredicted RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 CNIH4Q9P003 139 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ABI3Q9P2A4 366 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 CDC42EP3Q9UKI2 254 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ACAD8Q9UKU7 415 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 SLC35A3Q9Y2D2 325 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 AP4B1Q9Y6B7 739 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ENPP4Q9Y6X5 453 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 CHD8Q9HCK8 2581 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 DOCK10Q96BY6 2186 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CPSF4LA6NMK7 179 aaKnown RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 ENO4A6NNW6 628 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 VSTM5A8MXK1 200 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 GTPBP1O00178 669 aaKnown RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 EI24O14681 340 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 NME2P1O60361 137 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CDC40O60508 579 aaKnown RBP eCLIP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 LYPD3O95274 346 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 LY86O95711 162 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 P04436 131 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 FABP3P05413 133 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 LINGO3P0C6S8 592 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PTNP21246 168 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CNR1P21554 472 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PRKACGP22612 351 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CASRP41180 1078 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 IDH2P48735 452 aaKnown RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 P2RX1P51575 399 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CCR4P51679 360 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 MYBPC1Q00872 1141 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PMP22Q01453 160 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CD69Q07108 199 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 BLMHQ13867 455 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PDK3Q15120 406 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 ZIK1Q3SY52 487 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 EIPR1Q53HC9 387 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF766Q5HY98 468 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 ENTPD8Q5MY95 495 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 OTUD3Q5T2D3 398 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 TIGD3Q6B0B8 471 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 SLC25A25Q6KCM7 469 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 SLC30A6Q6NXT4 461 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 C19orf48Q6RUI8 117 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 UGT2A3Q6UWM9 527 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 Q6ZS92 163 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PIWIL3Q7Z3Z3 882 aaKnown RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 ANKRD13BQ86YJ7 626 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PLCZ1Q86YW0 608 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 TMCO5AQ8N6Q1 288 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 LSMEM1Q8N8F7 131 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 EXD3Q8N9H8 876 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 OR2M7Q8NG81 312 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 OR5W2Q8NH69 310 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 B4GALNT2Q8NHY0 566 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 GPR119Q8TDV5 335 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 DACT3Q96B18 629 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM41AQ96HV5 264 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 JSRP1Q96MG2 331 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PRSS27Q9BQR3 290 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 ADI1Q9BV57 179 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 UBQLN3Q9H347 655 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 KLHL28Q9NXS3 571 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 PPP4R1LQ9P1A2 415 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 VDAC3Q9Y277 283 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 TP53TG5Q9Y2B4 290 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 SLC9A8Q9Y2E8 581 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 U3KQV3 271 aa4.27□□□□□ -1.73
SF3B1-208ENST00000470268 CPAMD8Q8IZJ3 1885 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms