RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RPS26P11Q5JNZ5 115 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-210ENST00000469897 WBP2NLQ6ICG8 309 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF544Q6NX49 715 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 CLEC2AQ6UVW9 174 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 CROCCP2Q86T23 111 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 C17orf78Q8N4C9 275 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF525Q8N782 197 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
CPSF4-210ENST00000469897 VPS33AQ96AX1 596 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM45BQ96B21 275 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 TNFRSF13CQ96RJ3 184 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
CPSF4-210ENST00000469897 TAPBPLQ9BX59 468 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 MANSC1Q9H8J5 431 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 FKRPQ9H9S5 495 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 TPT1P8Q9HAU6 139 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM45AQ9NWC5 275 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 ADPRHL2Q9NX46 363 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF443Q9Y2A4 671 aaPredicted RBP11.62□□□□□ -0.55
CPSF4-210ENST00000469897 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
CPSF4-210ENST00000469897 ROS1P08922 2347 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 A0A096LNT2 108 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 A0A0G2JPF8 293 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 AQP7P3A6NL99 342 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 A8MV72 311 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-210ENST00000469897 A8MVM7 634 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 HNRNPCL2B2RXH8 293 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 HNRNPCL3B7ZW38 293 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 HNRNPCL1O60812 293 aaKnown RBP11.61□□□□□ -0.55
CPSF4-210ENST00000469897 LY6HO94772 140 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 ZCCHC18P0CG32 403 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 HNRNPCL4P0DMR1 293 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 NCF2P19878 526 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-210ENST00000469897 CRISP3P54108 245 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 DSTNP60981 165 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 CHRNB3Q05901 458 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 MST1LQ2TV78 715 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 ATG16L1Q676U5 607 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 CREB3L2Q70SY1 520 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 MAVSQ7Z434 540 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 KDM8Q8N371 416 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 POMGNT2Q8NAT1 580 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 C1orf162Q8NEQ5 155 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-210ENST00000469897 SPATA3Q8NHX4 192 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM19Q96HH6 336 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 ITCHQ96J02 903 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 MAELQ96JY0 434 aaKnown RBP11.61□□□□□ -0.55
CPSF4-210ENST00000469897 OR52B2Q96RD2 323 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 CALML5Q9NZT1 146 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 PMF1-BGLAPU3KQ54 211 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
CPSF4-210ENST00000469897 DSPPQ9NZW4 1301 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ELOA3DA6NLF2 546 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ATP6V1G2-DDX39BF2Z307 99 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 H7C417 338 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 NR5A2O00482 541 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 UBDO15205 165 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 FRS3O43559 492 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 LGI1O95970 557 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 WNT11O96014 354 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 F12P00748 615 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-210ENST00000469897 NUDT7P0C024 238 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 BMP4P12644 408 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 SELENOPP49908 381 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 P2RY4P51582 365 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 POLR2JP52435 117 aaKnown RBP11.6□□□□□ -0.55
CPSF4-210ENST00000469897 EFNA4P52798 201 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 HOXC5Q00444 222 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-210ENST00000469897 LARS2Q15031 903 aaKnown RBP11.6□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM249Q2WGJ8 235 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ELOA3BQ3SY89 546 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ZNF311Q5JNZ3 666 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 C6orf10Q5SRN2 563 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 C1orf140Q5VVS0 124 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 SERPINA11Q86U17 422 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 EPHX4Q8IUS5 362 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ELOA3Q8NG57 546 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 OR9I1Q8NGQ6 314 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 FAM168AQ92567 244 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 SLC25A36Q96CQ1 311 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 FBXO17Q96EF6 278 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 SPATA9Q9BWV2 254 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 RMND5AQ9H871 391 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 SDR39U1Q9NRG7 319 aaPredicted RBP11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ZIM2Q9NZV7 527 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 PRDM4Q9UKN5 801 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
CPSF4-210ENST00000469897 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 CSPG4Q6UVK1 2322 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
CPSF4-210ENST00000469897 IGHV1-18A0A0C4DH31 117 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 NPIPB7O75200 414 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 UPK3AO75631 287 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 VAMP5O95183 116 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 IFNA2P01563 188 aa11.59□□□□□ -0.55
CPSF4-210ENST00000469897 MAGOHP61326 146 aaKnown RBP11.59□□□□□ -0.55
CPSF4-210ENST00000469897 RGNQ15493 299 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms