RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 MCHR1Q99705 422 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 PKP2Q99959 881 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 WFDC6Q9BQY6 131 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 ALG8Q9BVK2 526 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 PINK1Q9BXM7 581 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 RSPO3Q9BXY4 272 aaPredicted RBP3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 TBL1XR1Q9BZK7 514 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 HOXD1Q9GZZ0 328 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 ING2Q9H160 280 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 ARMC7Q9H6L4 198 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 YY1AP1Q9H869 796 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 METTL7AQ9H8H3 244 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 CPNE5Q9HCH3 593 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 POLE3Q9NRF9 147 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 UBQLN4Q9NRR5 601 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 OLAHQ9NV23 265 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 HPF1Q9NWY4 346 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 GPR83Q9NYM4 423 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 KLRF1Q9NZS2 232 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 MED11Q9P086 117 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 ABI3Q9P2A4 366 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 RPS6KB2Q9UBS0 482 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 TEKT2Q9UIF3 430 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 ITGB1BP2Q9UKP3 347 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 NDRG4Q9ULP0 352 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 PPIEQ9UNP9 301 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 CARD8Q9Y2G2 431 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 NTNG1Q9Y2I2 539 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 YARS2Q9Y2Z4 477 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 DTNAQ9Y4J8 743 aa3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 CNOT1A5YKK6 2376 aaKnown RBP3.71□□□□□ -1.82
TMEM39A-204ENST00000468545 WDR87Q6ZQQ6 2873 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 GVINP1Q7Z2Y8 2422 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 FRYLO94915 3013 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 MED19A0JLT2 244 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR6C70A6NIJ9 312 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CLCA1A8K7I4 914 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 H3BNX3 289 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TNFRSF11BO00300 401 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CLOCKO15516 846 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 HCRTR2O43614 444 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 MGRN1O60291 552 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 E2F6O75461 281 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ANGPTL1O95841 491 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 WDPCPO95876 746 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 EPPINO95925 133 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 LGI1O95970 557 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 LDLRP01130 860 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 P04436 131 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 IFNW1P05000 195 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CCL3P10147 92 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PRG2P13727 222 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 NAGAP17050 411 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ITGA2P17301 1181 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PTNP21246 168 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TBXA2RP21731 343 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PRKACGP22612 351 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TNFSF4P23510 183 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PRKAR1BP31321 381 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 IFNA8P32881 189 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 EVI2BP34910 448 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 IDH2P48735 452 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DNASE1L1P49184 302 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CYB561P49447 251 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TMED10P49755 219 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CRYBA2P53672 197 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 IST1P53990 364 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CDH12P55289 794 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TAS2R41P59536 307 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 EEF1A1P68104 462 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 RPP38P78345 283 aaKnown RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ARG2P78540 354 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 VLDLRP98155 873 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SPIBQ01892 262 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC34A1Q06495 639 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 FHL2Q14192 279 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 FGFBP1Q14512 234 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 TOMM20Q15388 145 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 OR1Q1Q15612 314 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 INPP5JQ15735 1006 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CD226Q15762 336 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF141Q15928 474 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 NTRK2Q16620 822 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF791Q3KP31 576 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 KLHL26Q53HC5 615 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 EIPR1Q53HC9 387 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 AGAP7PQ5VUJ5 663 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC22A10Q63ZE4 541 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 LPCAT4Q643R3 524 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 HMBOX1Q6NT76 420 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 JMJD6Q6NYC1 403 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZFP1Q6P2D0 407 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DHRS4L2Q6PKH6 230 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 CBLN3Q6UW01 205 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ISLR2Q6UXK2 745 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 RTL4Q6ZR62 310 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 PLEKHM3Q6ZWE6 761 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF550Q7Z398 422 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 MDGA2Q7Z553 956 aa3.7□□□□□ -1.82
TMEM39A-204ENST00000468545 DTX2Q86UW9 622 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms