RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SPNP16150 400 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 MYL12AP19105 171 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 CASP3P42574 277 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 RAB40BQ12829 278 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 TMEM44Q2T9K0 475 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 SYT14P1Q58G82 188 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 TMPRSS11AQ6ZMR5 421 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 MEX3DQ86XN8 651 aaKnown RBP16.95■□□□□ 0.3
CAPN3-209ENST00000466222 RAB43Q86YS6 212 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF582Q96NG8 517 aaPredicted RBP16.95■□□□□ 0.3
CAPN3-209ENST00000466222 MED18Q9BUE0 208 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 TBL1XR1Q9BZK7 514 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 TMEM129A0AVI4 362 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 ALG1L2C9J202 215 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 TLX2O43763 284 aaPredicted RBP16.94■□□□□ 0.3
CAPN3-209ENST00000466222 WISP1O95388 367 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SERPINA7P05543 415 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 FBXO45P0C2W1 286 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 UBL4AP11441 157 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 ICAM2P13598 275 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 IFNA8P32881 189 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 PSPHP78330 225 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SKP2Q13309 424 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 DOC2BQ14184 412 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 OR1Q1Q15612 314 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 INPP5JQ15735 1006 aaPredicted RBP16.94■□□□□ 0.3
CAPN3-209ENST00000466222 KCNJ8Q15842 424 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 BCL2A1Q16548 175 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF791Q3KP31 576 aaPredicted RBP16.94■□□□□ 0.3
CAPN3-209ENST00000466222 PLEKHM3Q6ZWE6 761 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 GRAMD2AQ8IUY3 354 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 NKAIN4Q8IVV8 208 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 TEX47Q8TBZ9 253 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SLC22A8Q8TCC7 542 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 CMAHPQ9Y471 501 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 PTPRBP23467 1997 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 GTPBP1O00178 669 aaKnown RBP16.94■□□□□ 0.3
CAPN3-209ENST00000466222 PRODHO43272 600 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 NDUFB5O43674 189 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 CCR4P51679 360 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 WNT4P56705 351 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 MLF1P58340 268 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF117Q03924 483 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 AGAP6Q5VW22 663 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF544Q6NX49 715 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 GDF7Q7Z4P5 450 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 TMEM163Q8TC26 289 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SLC25A46Q96AG3 418 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SPACA9Q96E40 222 aaPredicted RBP16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SLC41A3Q96GZ6 507 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 LRR1Q96L50 414 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 AGAP4Q96P64 663 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 BARHL1Q9BZE3 327 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 SLC7A7Q9UM01 511 aa16.94■□□□□ 0.3
CAPN3-209ENST00000466222 EXOSC1Q9Y3B2 195 aaKnown RBP16.94■□□□□ 0.3
CAPN3-209ENST00000466222 HCRTR2O43614 444 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 TRAM2Q15035 370 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 WDR88Q6ZMY6 472 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 RANBP3LQ86VV4 465 aaPredicted RBP16.93■□□□□ 0.3
CAPN3-209ENST00000466222 CADM2Q8N3J6 435 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 FAM71CQ8NEG0 241 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 IL17RDQ8NFM7 739 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 ASB15Q8WXK1 588 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 NXPE2Q96DL1 559 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 SLC38A2Q96QD8 506 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 YARS2Q9Y2Z4 477 aaKnown RBP16.93■□□□□ 0.3
CAPN3-209ENST00000466222 CAB39Q9Y376 341 aaPredicted RBP16.93■□□□□ 0.3
CAPN3-209ENST00000466222 V9GYH0 126 aa16.93■□□□□ 0.3
CAPN3-209ENST00000466222 RGS5O15539 181 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 EFSO43281 561 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF264O43296 627 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 ADH7P40394 386 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TSPAN31Q12999 210 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TOMM34Q15785 309 aaPredicted RBP16.92■□□□□ 0.3
CAPN3-209ENST00000466222 SNAPC1Q16533 368 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 NTRK2Q16620 822 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 PRAMEF20Q5VT98 475 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 SLC27A4Q6P1M0 643 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 RASSF6Q6ZTQ3 369 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 CMIPQ8IY22 773 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 OR8H2Q8N162 312 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 IQCF1Q8N6M8 205 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TMEM255BQ8WV15 326 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 FAM117AQ9C073 453 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 SNTG1Q9NSN8 517 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TXNL4BQ9NX01 149 aaKnown RBP16.92■□□□□ 0.3
CAPN3-209ENST00000466222 SLC35A3Q9Y2D2 325 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 SPTBN4Q9H254 2564 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 A0A087WUU8 490 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 ARGFXA6NJG6 315 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 A6NL46 340 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 LYPD3O95274 346 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 NGFRP08138 427 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TSPAN19P0C672 248 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 NAGAP17050 411 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 SDHBP21912 280 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 ITGA3P26006 1051 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 MST1P26927 711 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 PTGDSP41222 190 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms