RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MEMO1Q9Y316 297 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 PTCH1Q13635 1447 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 RPAP1Q9BWH6 1393 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 C15orf38-AP3S2A0A0A6YYH1 394 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 E9PBE3 544 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 LOC110117498-PIK3R3F6TDL0 507 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 TRAF3IP2O43734 574 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 SPAG6O75602 509 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 KLF8O95600 359 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 INSP01308 110 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 HOXC4P09017 264 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 CMA1P23946 247 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 CXCR2P25025 360 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 DDOSTP39656 456 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 GLP1RP43220 463 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 IFNAR2P48551 515 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 ARRB1P49407 418 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 SH3BGRP55822 239 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 VGLL4Q14135 290 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 PDK3Q15120 406 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 NRF1Q16656 503 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 PAGE3Q5JUK9 113 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 OR52E8Q6IFG1 317 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 RFLNAQ6ZTI6 216 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 ZNF571Q7Z3V5 609 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 PPP1R42Q7Z4L9 355 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 VSTM4Q8IW00 320 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 ZNF540Q8NDQ6 660 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 TRPV1Q8NER1 839 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 OR4K14Q8NGD5 310 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 FAM151AQ8WW52 585 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 SLC25A39Q9BZJ4 359 aaPredicted RBP2.77□□□□□ -1.97
LRCH3-211ENST00000466054 OR11A1Q9GZK7 315 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 RBKSQ9H477 322 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 TMCO1Q9UM00 188 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 CACNG2Q9Y698 323 aa2.77□□□□□ -1.97
LRCH3-211ENST00000466054 AGPAT2O15120 278 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 RGS16O15492 202 aaPredicted RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 MED7O43513 233 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 FAM189A1O60320 539 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 SNNO75324 88 aaPredicted RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 ATP5LO75964 103 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 KLK3P07288 261 aaPredicted RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 PSG2P11465 335 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 ICAM2P13598 275 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 IL12AP29459 219 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 MECOMQ03112 1051 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 ATP6AP1Q15904 470 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 BCL7AQ4VC05 210 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 LRRC23Q53EV4 343 aaPredicted RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 BOLA3Q53S33 107 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 OR2G6Q5TZ20 316 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 Q8N9L7 120 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 FGF11Q92914 225 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 RPUSD4Q96CM3 377 aaKnown RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 FAM210BQ96KR6 192 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 RBM14Q96PK6 669 aaKnown RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 CLCC1Q96S66 551 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 RNF2Q99496 336 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 RASL11BQ9BPW5 248 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 ZNF331Q9NQX6 463 aaPredicted RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 NUFIP1Q9UHK0 495 aaKnown RBP2.76□□□□□ -1.97
LRCH3-211ENST00000466054 NEU3Q9UQ49 428 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 TRAF3IP3Q9Y228 551 aa2.76□□□□□ -1.97
LRCH3-211ENST00000466054 PLEKHH1Q9ULM0 1364 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 FANCIQ9NVI1 1328 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 TRAV26-1A0A087WT03 109 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 IQANK1A0A1B0GTG1 560 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 NKX2-6A6NCS4 301 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CCDC182A6NF36 153 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 A8MXQ7 604 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CPLX1O14810 134 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 MBTPS2O43462 519 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 RAMP3O60896 148 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 DIRAS1O95057 198 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CHTF8P0CG12 524 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 RPS2P15880 293 aaKnown RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CRISP2P16562 243 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 GLRA2P23416 452 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 GNA11P29992 359 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CCR1P32246 355 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 PRPHP41219 470 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 QARSP47897 775 aaKnown RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 UCNP55089 124 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 NCBP1Q09161 790 aaKnown RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 OXA1LQ15070 435 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 KLHL38Q2WGJ6 581 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CARD16Q5EG05 197 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 MARCH8Q5T0T0 291 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 KHDRBS2Q5VWX1 349 aaKnown RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 CYB5R2Q6BCY4 276 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 OR4F3Q6IEY1 312 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 GALNT17Q6IS24 598 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 C6orf89Q6UWU4 347 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 PGAP1Q75T13 922 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 COX15Q7KZN9 410 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 SLC26A11Q86WA9 606 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 ZNF433Q8N7K0 673 aaPredicted RBP2.75□□□□□ -1.97
LRCH3-211ENST00000466054 MFSD9Q8NBP5 474 aa2.75□□□□□ -1.97
LRCH3-211ENST00000466054 OR52M1Q8NGK5 317 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms