RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 MBD3L5A6NJ08 208 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TRPC5OSA6NMA1 111 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CLCA1A8K7I4 914 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF785A8K8V0 405 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 HMGB1P1B2RPK0 211 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 F5H697 171 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 H3BML4 177 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 UBDO15205 165 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC22A3O75751 556 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 UGT2B17O75795 530 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 AQP8O94778 261 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SNUPNO95149 360 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ACTL6AO96019 429 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 NGFRP08138 427 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CHRM4P08173 479 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 LINGO3P0C6S8 592 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ETFAP13804 333 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CPN1P15169 458 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 KLK2P20151 261 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CAPN3P20807 821 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 UQCRC2P22695 453 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CHRNB4P30926 498 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 S100A3P33764 101 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 RPL3P39023 403 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SMSP52788 366 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 DSCR4P56555 118 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 RPP38P78345 283 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SKP2Q13309 424 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 GPR68Q15743 365 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CTU2Q2VPK5 515 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 PLPPR5Q32ZL2 321 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ARHGAP11BQ3KRB8 267 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 VPS26BQ4G0F5 336 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 PAGE3Q5JUK9 113 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 PDZK1Q5T2W1 519 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 RIPPLY2Q5TAB7 128 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 NSUN5P2Q63ZY6 315 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TMEM211Q6ICI0 200 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TYW3Q6IPR3 259 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 HEPHL1Q6MZM0 1159 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 MTFR2Q6P444 385 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ZCCHC12Q6PEW1 402 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC2A7Q6PXP3 512 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 FRRS1Q6ZNA5 592 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SPATA19Q7Z5L4 167 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 LRRC34Q8IZ02 419 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ANKFN1Q8N957 763 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 OR4K17Q8NGC6 315 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 MBD3L2Q8NHZ7 208 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ZPLD1Q8TCW7 415 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 MIPOL1Q8TD10 442 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 GPR119Q8TDV5 335 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ADAMTS15Q8TE58 950 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ZFP90Q8TF47 636 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 CA5BP1Q8WTZ4 195 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 XAGE5Q8WWM1 108 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 FIG4Q92562 907 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 GTF2H4Q92759 462 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 INTS12Q96CB8 462 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 NEURL3Q96EH8 262 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ADGRG7Q96K78 797 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC35G5Q96KT7 338 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 RNF145Q96MT1 663 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SFXN2Q96NB2 322 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 OR52E6Q96RD3 313 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 PRPF18Q99633 342 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC35A5Q9BS91 424 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TBL1XR1Q9BZK7 514 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 AMBRA1Q9C0C7 1298 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF350Q9GZX5 532 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 PAIP1Q9H074 479 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 IKZF5Q9H5V7 419 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF385DQ9H6B1 395 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TMEM185BQ9H7F4 350 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TCF7L2Q9NQB0 619 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SDR39U1Q9NRG7 319 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 UBQLN4Q9NRR5 601 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 INTS9Q9NV88 658 aaKnown RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 MED17Q9NVC6 651 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC25A37Q9NYZ2 338 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 BTNL2Q9UIR0 455 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 DKKL1Q9UK85 242 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 ICAM5Q9UMF0 924 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 FAF1Q9UNN5 650 aaPredicted RBP4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 L3MBTL1Q9Y468 752 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 PCDHGB3Q9Y5G1 929 aa4.29□□□□□ -1.72
EXOSC3-204ENST00000465860 TRBV5-3A0A0A0MS03 114 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 A0A0J9YW62 118 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 A0A1W2PQD3 144 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 CD8B2A6NJW9 211 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 TTC36A6NLP5 189 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 H0Y3Z8 333 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 SEC14L5O43304 696 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 HCRTR2O43614 444 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 KIAA0513O60268 411 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 EDF1O60869 148 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 TNFSF13O75888 250 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 H6PDO95479 791 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms