RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 DDIT4LQ96D03 193 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 ZG16BQ96DA0 208 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 ZMYND19Q96E35 227 aaPredicted RBP10.2□□□□□ -0.78
CNOT4-208ENST00000465721 ALKBH3Q96Q83 286 aaPredicted RBP10.2□□□□□ -0.78
CNOT4-208ENST00000465721 KCNS3Q9BQ31 491 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 NAA11Q9BSU3 229 aaPredicted RBP10.2□□□□□ -0.78
CNOT4-208ENST00000465721 RAB1BQ9H0U4 201 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 ZNF442Q9H7R0 627 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 MID2Q9UJV3 735 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 TMED7Q9Y3B3 224 aa10.2□□□□□ -0.78
CNOT4-208ENST00000465721 NOTCH1P46531 2555 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 PRAMEF27A3QJZ7 478 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 AQP7P3A6NL99 342 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 hCG_2039718K7EN88 272 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 NR5A2O00482 541 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 RNASET2O00584 256 aaKnown RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 NPHS1O60500 1241 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 TRIM13O60858 407 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 SNUPNO95149 360 aaKnown RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 IGKV3-15P01624 115 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 SHBGP04278 402 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 G6PDP11413 515 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 TACR3P29371 465 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 ARRB2P32121 409 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 P2RY4P51582 365 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 CCNIQ14094 377 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 OR4F3Q6IEY1 312 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 ANKRD16Q6P6B7 361 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 AAED1Q7RTV5 226 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 ABHD12BQ7Z5M8 362 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 HOMEZQ8IX15 550 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 ZCCHC24Q8N2G6 241 aaKnown RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 ZNF786Q8N393 782 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 SVOPLQ8N434 492 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 TMEM99Q8N816 258 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 OR4F15Q8NGB8 312 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 NEU4Q8WWR8 484 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 BCL2L2Q92843 193 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 PMM1Q92871 262 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 RAB8BQ92930 207 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 AURKBQ96GD4 344 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 PRPF18Q99633 342 aaKnown RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 DOK1Q99704 481 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 SF3B5Q9BWJ5 86 aaKnown RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 METTL17Q9H7H0 456 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-208ENST00000465721 VWFP04275 2813 aa10.19□□□□□ -0.78
CNOT4-208ENST00000465721 TMEM129A0AVI4 362 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 LIPT2A6NK58 231 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 ZNF587BE7ETH6 402 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 FAAHO00519 579 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 SKAP2O75563 359 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-208ENST00000465721 AKR7A3O95154 331 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 AGR2O95994 175 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 CELA3BP08861 270 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 KRT4P19013 534 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 PCMT1P22061 227 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 THBS4P35443 961 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 SELENOPP49908 381 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 KHKP50053 298 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 KCNJ10P78508 379 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 PGS1Q32NB8 556 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 ATAD3BQ5T9A4 648 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 SAXO2Q658L1 398 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 CDK20Q8IZL9 346 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 C4orf33Q8N1A6 199 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 FAM169BQ8N8A8 192 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 OR4A15Q8NGL6 344 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 MAGEE2Q8TD90 523 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-208ENST00000465721 WDR60Q8WVS4 1066 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 XAGE5Q8WWM1 108 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 C16orf45Q96MC5 204 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-208ENST00000465721 ZNF317Q96PQ6 595 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-208ENST00000465721 MECRQ9BV79 373 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 PIF1Q9H611 641 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-208ENST00000465721 TMEM45AQ9NWC5 275 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 FBXO9Q9UK97 447 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-208ENST00000465721 PCDHB14Q9Y5E9 798 aa10.18□□□□□ -0.78
CNOT4-208ENST00000465721 IGHV2OR16-5A0A0B4J2B6 119 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 LYNX1G3V0Z9 82 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 SCN2BO60939 215 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 C1QCP02747 245 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 GPIP06744 558 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 ERCC1P07992 297 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-208ENST00000465721 LYNX1P0DP58 116 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 IFNGR1P15260 489 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 NPR2P20594 1047 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 RPS4Y1P22090 263 aaKnown RBP10.17□□□□□ -0.78
CNOT4-208ENST00000465721 PAX7P23759 505 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 ALDH3A1P30838 453 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 MAP2K6P52564 334 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 CLDN8P56748 225 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 UBE2NP61088 152 aaKnown RBP10.17□□□□□ -0.78
CNOT4-208ENST00000465721 ACTG1P63261 375 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 CEACAM7Q14002 265 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 OR7A5Q15622 319 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 ZCCHC23Q6ZST2 131 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 GPAT4Q86UL3 456 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 GLCCI1Q86VQ1 547 aa10.17□□□□□ -0.78
CNOT4-208ENST00000465721 CMIPQ8IY22 773 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms