RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 DCAF13Q9NV06 445 aaKnown RBP18.09■□□□□ 0.49
SKA3-205ENST00000465471 TAS2R1Q9NYW7 299 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 SELENONQ9NZV5 590 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 MAGEL2Q9UJ55 1249 aa18.09■□□□□ 0.49
SKA3-205ENST00000465471 CRYBG3Q68DQ2 2970 aa18.08■□□□□ 0.49
SKA3-205ENST00000465471 TRAV36DV7A0A075B6V5 113 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 OR5F1O95221 314 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 ZNF682O95780 498 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 YES1P07947 543 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 TCN1P20061 433 aaPredicted RBP18.08■□□□□ 0.48
SKA3-205ENST00000465471 ZNF474Q6S9Z5 364 aaPredicted RBP18.08■□□□□ 0.48
SKA3-205ENST00000465471 DEF8Q6ZN54 512 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 LUZP2Q86TE4 346 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 GEMIN6Q8WXD5 167 aaKnown RBP18.08■□□□□ 0.48
SKA3-205ENST00000465471 TAAR8Q969N4 342 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 MPP4Q96JB8 637 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 ZNF300Q96RE9 604 aaPredicted RBP18.08■□□□□ 0.48
SKA3-205ENST00000465471 PRSS27Q9BQR3 290 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 TAPBPLQ9BX59 468 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 OPN3Q9H1Y3 402 aaPredicted RBP18.08■□□□□ 0.48
SKA3-205ENST00000465471 RPS6KA6Q9UK32 745 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 SLC7A7Q9UM01 511 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 PROCRQ9UNN8 238 aa18.08■□□□□ 0.48
SKA3-205ENST00000465471 ANKHD1Q8IWZ3 2542 aaKnown RBP18.08■□□□□ 0.48
SKA3-205ENST00000465471 PKDREJQ9NTG1 2253 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 AQP7P3A6NL99 342 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 ARPC2O15144 300 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 OR2T1O43869 369 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 RPS5P46782 204 aaKnown RBP18.07■□□□□ 0.48
SKA3-205ENST00000465471 IFI44LQ53G44 452 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 TMEM201Q5SNT2 666 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 FAM69AQ5T7M9 428 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 NUFIP2Q7Z417 695 aaKnown RBP18.07■□□□□ 0.48
SKA3-205ENST00000465471 GDF7Q7Z4P5 450 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 CCDC103Q8IW40 242 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 DMRTC2Q8IXT2 367 aaPredicted RBP18.07■□□□□ 0.48
SKA3-205ENST00000465471 TMEM99Q8N816 258 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 LRRC46Q96FV0 321 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 SLC41A3Q96GZ6 507 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 PRRC1Q96M27 445 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 NAA11Q9BSU3 229 aaPredicted RBP18.07■□□□□ 0.48
SKA3-205ENST00000465471 RBM24Q9BX46 236 aaKnown RBP18.07■□□□□ 0.48
SKA3-205ENST00000465471 AMBRA1Q9C0C7 1298 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 GALNT8Q9NY28 637 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 PRPF19Q9UMS4 504 aaKnown RBP18.07■□□□□ 0.48
SKA3-205ENST00000465471 A4GNTQ9UNA3 340 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 SNX13Q9Y5W8 968 aa18.07■□□□□ 0.48
SKA3-205ENST00000465471 CENPEQ02224 2701 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 SMNDC1O75940 238 aaKnown RBP eCLIP18.06■□□□□ 0.48
SKA3-205ENST00000465471 AKR7A3O95154 331 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 IFNW1P05000 195 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 THRBP10828 461 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 MSX2P35548 267 aaPredicted RBP18.06■□□□□ 0.48
SKA3-205ENST00000465471 SORDQ00796 357 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 PIN1Q13526 163 aaPredicted RBP18.06■□□□□ 0.48
SKA3-205ENST00000465471 SLC17A1Q14916 467 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 OTUD3Q5T2D3 398 aaPredicted RBP18.06■□□□□ 0.48
SKA3-205ENST00000465471 TFAP2EQ6VUC0 442 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 TSEN54Q7Z6J9 526 aaKnown RBP18.06■□□□□ 0.48
SKA3-205ENST00000465471 P3H2Q8IVL5 708 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 FAM86B1Q8N7N1 296 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 ZNF610Q8N9Z0 462 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 EPYCQ99645 322 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 SLC19A3Q9BZV2 496 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 EMC3Q9P0I2 261 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 RIMS3Q9UJD0 308 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 SAMD4AQ9UPU9 718 aaKnown RBP18.06■□□□□ 0.48
SKA3-205ENST00000465471 CELSR2Q9HCU4 2923 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 FREM1Q5H8C1 2179 aa18.06■□□□□ 0.48
SKA3-205ENST00000465471 GMNNO75496 209 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 BGLAPP02818 100 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 SEMG1P04279 462 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 UQCRC1P31930 480 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 TAS2R41P59536 307 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 LTBQ06643 244 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 ZNF787Q6DD87 383 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 MEX3BQ6ZN04 569 aaKnown RBP18.05■□□□□ 0.48
SKA3-205ENST00000465471 RNF217Q8TC41 542 aa18.05■□□□□ 0.48
SKA3-205ENST00000465471 SLC7A6OSQ96CW6 309 aaPredicted RBP18.05■□□□□ 0.48
SKA3-205ENST00000465471 SF3B5Q9BWJ5 86 aaKnown RBP18.05■□□□□ 0.48
SKA3-205ENST00000465471 GPR171O14626 319 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 FFAR1O14842 300 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 PRSS23O95084 383 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 COX6B1P14854 86 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 PEX19P40855 299 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 RBM34P42696 430 aaKnown RBP18.04■□□□□ 0.48
SKA3-205ENST00000465471 MFSD13AQ14CX5 517 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 GALNT5Q7Z7M9 940 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 NKAIN4Q8IVV8 208 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 OFCC1Q8IZS5 231 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 ADPRHL1Q8NDY3 354 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 C7orf34Q96L11 122 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 NSMCE2Q96MF7 247 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 C12orf49Q9H741 205 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 ELOVL5Q9NYP7 299 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 ACTR3BQ9P1U1 418 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 FLVCR1Q9Y5Y0 555 aa18.04■□□□□ 0.48
SKA3-205ENST00000465471 VAMP5O95183 116 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 IGF2P01344 180 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 PTNP21246 168 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms