RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 HOXB4P17483 251 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-206ENST00000464750 PPIBP23284 216 aaKnown RBP22.76■■□□□ 1.23
U2AF1-206ENST00000464750 IRX1P78414 480 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-206ENST00000464750 HOXC5Q00444 222 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 C1orf140Q5VVS0 124 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 OR9K2Q8NGE7 335 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 SLC35B4Q969S0 331 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 TMEM45BQ96B21 275 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 SF3B5Q9BWJ5 86 aaKnown RBP22.76■■□□□ 1.23
U2AF1-206ENST00000464750 SLC7A10Q9NS82 523 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 TMEM45AQ9NWC5 275 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 MAGED1Q9Y5V3 778 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-206ENST00000464750 SLC25A15Q9Y619 301 aa22.76■■□□□ 1.23
U2AF1-206ENST00000464750 NSD1Q96L73 2696 aaPredicted RBP22.76■■□□□ 1.23
U2AF1-206ENST00000464750 TRBV5-3A0A0A0MS03 114 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 A0A1W2PR80 420 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 SHISA9B4DS77 424 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 PDLIM1O00151 329 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 ABCD4O14678 606 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 SMAD7O15105 426 aaKnown RBP22.75■■□□□ 1.23
U2AF1-206ENST00000464750 ETS2P15036 469 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 CDH11P55287 796 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 GABRA6Q16445 453 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 TSPO2Q5TGU0 170 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 C9orf135Q5VTT2 229 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 GPAT4Q86UL3 456 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 CKAP2Q8WWK9 683 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 THOC1Q96FV9 657 aaKnown RBP22.75■■□□□ 1.23
U2AF1-206ENST00000464750 ZNF385AQ96PM9 386 aaKnown RBP22.75■■□□□ 1.23
U2AF1-206ENST00000464750 VIPAS39Q9H9C1 493 aa22.75■■□□□ 1.23
U2AF1-206ENST00000464750 ARGLU1Q9NWB6 273 aaPredicted RBP22.75■■□□□ 1.23
U2AF1-206ENST00000464750 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.75■■□□□ 1.23
U2AF1-206ENST00000464750 FAM171A2A8MVW0 826 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 NPIPB7O75200 414 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 AHSA1O95433 338 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 PRKAR1BP31321 381 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 ZNF83P51522 516 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 CDK6Q00534 326 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 LTBQ06643 244 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 OR7E24Q6IFN5 339 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 STK35Q8TDR2 534 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 GTPBP3Q969Y2 492 aaKnown RBP22.74■■□□□ 1.23
U2AF1-206ENST00000464750 MAGEB18Q96M61 343 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 MUS81Q96NY9 551 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 AMBRA1Q9C0C7 1298 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 IKZF5Q9H5V7 419 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 DCTN4Q9UJW0 460 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 GMEB1Q9Y692 573 aa22.74■■□□□ 1.23
U2AF1-206ENST00000464750 OVOL3O00110 214 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 HEXAP06865 529 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 P2RY4P51582 365 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 PGGHGQ32M88 737 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 KRTAP21-3Q3LHN1 58 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 TMEM225Q6GV28 225 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 REEP3Q6NUK4 255 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 TMEM108Q6UXF1 575 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 AAED1Q7RTV5 226 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 KRT73Q86Y46 540 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 ZIC4Q8N9L1 334 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 C1orf162Q8NEQ5 155 aaPredicted RBP22.73■■□□□ 1.23
U2AF1-206ENST00000464750 STON2Q8WXE9 905 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 RSPO3Q9BXY4 272 aaPredicted RBP22.73■■□□□ 1.23
U2AF1-206ENST00000464750 SLCO5A1Q9H2Y9 848 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 CISD1Q9NZ45 108 aaKnown RBP22.73■■□□□ 1.23
U2AF1-206ENST00000464750 RPS6KB2Q9UBS0 482 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 CORO2BQ9UQ03 480 aa22.73■■□□□ 1.23
U2AF1-206ENST00000464750 TLN2Q9Y4G6 2542 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 HEATR1Q9H583 2144 aaKnown RBP22.72■■□□□ 1.23
U2AF1-206ENST00000464750 H2AFXP16104 143 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-206ENST00000464750 CDKN1AP38936 164 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 DHRS4L2Q6PKH6 230 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 KLHL17Q6TDP4 642 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 COMTD1Q86VU5 262 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 SPATA5L1Q9BVQ7 753 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 RABEP2Q9H5N1 569 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 PIF1Q9H611 641 aa22.72■■□□□ 1.23
U2AF1-206ENST00000464750 ELOA3DA6NLF2 546 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-206ENST00000464750 EVPLLA8MZ36 301 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 LY6G6DO95868 133 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 SPOCK1Q08629 439 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 SCARB2Q14108 478 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 ELOA3BQ3SY89 546 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 C6orf89Q6UWU4 347 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 C17orf78Q8N4C9 275 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 ELOA3Q8NG57 546 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 TRMT61AQ96FX7 289 aaKnown RBP22.71■■□□□ 1.23
U2AF1-206ENST00000464750 CPPED1Q9BRF8 314 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-206ENST00000464750 PTDSS2Q9BVG9 487 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 ALG2Q9H553 416 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 TMEM38AQ9H6F2 299 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 MGAT4BQ9UQ53 548 aa22.71■■□□□ 1.23
U2AF1-206ENST00000464750 FTCDNL1E5RQL4 147 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 M0R1B8 84 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 VAMP5O95183 116 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 GPX2P18283 190 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 PTAFRP25105 342 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 CD40P25942 277 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 HTR2AP28223 471 aa22.7■■□□□ 1.22
U2AF1-206ENST00000464750 GTF2E2P29084 291 aaKnown RBP22.7■■□□□ 1.22
U2AF1-206ENST00000464750 MPGP29372 298 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms