RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GTPBP3Q969Y2 492 aaKnown RBP12.89□□□□□ -0.35
COL6A1-202ENST00000463060 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 TIMP4Q99727 224 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 FKRPQ9H9S5 495 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF229Q9UJW7 825 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 SIGLEC7Q9Y286 467 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 PRRC2CQ9Y520 2896 aaKnown RBP12.89□□□□□ -0.35
COL6A1-202ENST00000463060 A0A1W2PNR3 127 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 UNC119BA6NIH7 251 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 EFCAB9A8MZ26 197 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 NPIPA5E9PKD4 350 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 AQP7O14520 342 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 AHSA1O95433 338 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 PMS2P2O95744 297 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 TFPIP10646 304 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 IGFBP5P24593 272 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 SFTPDP35247 375 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 IDUAP35475 653 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 SLC9A3P48764 834 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
COL6A1-202ENST00000463060 H3F3AP84243 136 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 LY6DQ14210 128 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 FGD2Q7Z6J4 655 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 CISD2Q8N5K1 135 aaKnown RBP12.88□□□□□ -0.35
COL6A1-202ENST00000463060 CLDN22Q8N7P3 220 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 WDYHV1Q96HA8 205 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 RDH12Q96NR8 316 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 OR5B2Q96R09 309 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 TNFRSF13CQ96RJ3 184 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 ENKD1Q9H0I2 346 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 TSPAN10Q9H1Z9 355 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-202ENST00000463060 KRCC1Q9NPI7 259 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-202ENST00000463060 KRT84Q9NSB2 600 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 IL20Q9NYY1 176 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 NPIPA1Q9UND3 350 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 POFUT2Q9Y2G5 429 aa12.88□□□□□ -0.35
COL6A1-202ENST00000463060 GJE1A6NN92 205 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 IGFBP1P08833 259 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 OSMP13725 252 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 GRPRP30550 384 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 UQCRC1P31930 480 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 POLR2IP36954 125 aaKnown RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 DIO1P49895 249 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 P2RY4P51582 365 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 TDGF1P3P51864 188 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 AGFG1P52594 562 aaKnown RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 ESRRGP62508 458 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 MFSD13AQ14CX5 517 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 RFX4Q33E94 735 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 ANKDD1AQ495B1 522 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 ZBED5Q49AG3 693 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 OAFQ86UD1 273 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 OR13C2Q8NGS9 318 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 OR2V1Q8NHB1 315 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 FAR1Q8WVX9 515 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 GPR137Q96N19 417 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 MBOAT4Q96T53 435 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 SLX1AQ9BQ83 275 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 GABARAPL3Q9BY60 117 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 LDAHQ9H6V9 325 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF556Q9HAH1 456 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 MCCC2Q9HCC0 563 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 FANCFQ9NPI8 374 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 NANSQ9NR45 359 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 PAPOLBQ9NRJ5 636 aaKnown RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
COL6A1-202ENST00000463060 TAS2R5Q9NYW4 299 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 HIF3AQ9Y2N7 669 aa12.87□□□□□ -0.35
COL6A1-202ENST00000463060 ATRXP46100 2492 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 MS4A18H0YCH9 400 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SULT2B1O00204 365 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 DNPH1O43598 174 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SNAP29O95721 258 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 EPHA2P29317 976 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 RAC3P60763 192 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 ZP4Q12836 540 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 NPRL3Q12980 569 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 OR7A5Q15622 319 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SGCBQ16585 318 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 MS4A18Q3C1V0 323 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 KRTCAP3Q53RY4 240 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 FAM180AQ6UWF9 173 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF620Q6ZNG0 422 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 MAMDC2Q7Z304 686 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-202ENST00000463060 GALNT5Q7Z7M9 940 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SCAIQ8N9R8 606 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 LRRC75AQ8NAA5 344 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 ADPRHL1Q8NDY3 354 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 OR8D4Q8NGM9 314 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 OR5J2Q8NH18 312 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 OSTF1Q92882 214 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 RELTQ969Z4 430 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SLC25A36Q96CQ1 311 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 DNAJA3Q96EY1 480 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms