RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 M0R3H8 397 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 FXYD1O00168 92 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 MRPL33O75394 65 aaKnown RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 GCM2O75603 506 aaPredicted RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 LYZL6O75951 148 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 MFN2O95140 757 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 NPPAP01160 153 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 IGHV3-9P01782 118 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 SLC16A1P53985 500 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 PCBP3P57721 371 aaKnown RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 P2RY6Q15077 328 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 ACKR1Q16570 336 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 VMACQ2NL98 169 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 SFRP5Q5T4F7 317 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 Q6ZT83 130 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 BHLHA15Q7RTS1 189 aaPredicted RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 GPAT4Q86UL3 456 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 STK35Q8TDR2 534 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 DNAJA4Q8WW22 397 aaPredicted RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 SLC25A36Q96CQ1 311 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 RCN3Q96D15 328 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 ELAC2Q9BQ52 826 aaKnown RBP13.62□□□□□ -0.23
VARS-219ENST00000461328 EVA1AQ9H8M9 152 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 SLC9A8Q9Y2E8 581 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 ITPR3Q14573 2671 aa13.62□□□□□ -0.23
VARS-219ENST00000461328 M0QX08 132 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 KLF4O43474 513 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 PNMTP11086 282 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 EDNRAP25101 427 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 LOXP28300 417 aaPredicted RBP13.61□□□□□ -0.23
VARS-219ENST00000461328 RPS5P46782 204 aaKnown RBP13.61□□□□□ -0.23
VARS-219ENST00000461328 NR1H2P55055 460 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 ADAM8P78325 824 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 H3F3AP84243 136 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 ITGADQ13349 1161 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 STK11Q15831 433 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 TMEM99Q8N816 258 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 LSMEM1Q8N8F7 131 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 VANGL1Q8TAA9 524 aaPredicted RBP13.61□□□□□ -0.23
VARS-219ENST00000461328 PLPPR2Q96GM1 343 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 CCL19Q99731 98 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 TMUB1Q9BVT8 246 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 PRR14Q9BWN1 585 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 C12orf10Q9HB07 376 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 MED13LQ71F56 2210 aa13.61□□□□□ -0.23
VARS-219ENST00000461328 AQP7P3A6NL99 342 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 SMPD2O60906 423 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 SEC24CP53992 1094 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 IL1RL1Q01638 556 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 FOXD4Q12950 439 aaPredicted RBP13.6□□□□□ -0.23
VARS-219ENST00000461328 OR1Q1Q15612 314 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 FBXW9Q5XUX1 488 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 TMEM225Q6GV28 225 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 ERICH5Q6P6B1 374 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 ULK3Q6PHR2 472 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 ZNF704Q6ZNC4 412 aaPredicted RBP13.6□□□□□ -0.23
VARS-219ENST00000461328 C20orf204Q6ZNR8 217 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 RP9Q8TA86 221 aaKnown RBP13.6□□□□□ -0.23
VARS-219ENST00000461328 RASSF5Q8WWW0 418 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 SLC38A4Q969I6 547 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 PIGTQ969N2 578 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 TAMM41Q96BW9 452 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 SLC47A1Q96FL8 570 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 MCHR1Q99705 422 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 ARHGDIGQ99819 225 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 USB1Q9BQ65 265 aaKnown RBP13.6□□□□□ -0.23
VARS-219ENST00000461328 RSPO3Q9BXY4 272 aaPredicted RBP13.6□□□□□ -0.23
VARS-219ENST00000461328 PARPBPQ9NWS1 579 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 UPB1Q9UBR1 384 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 FLVCR1Q9Y5Y0 555 aa13.6□□□□□ -0.23
VARS-219ENST00000461328 CIB4A0PJX0 185 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 CCT8L1PA6NM43 557 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 AIM2O14862 343 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 NPIPB7O75200 414 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 CNOT4O95628 575 aaKnown RBP13.59□□□□□ -0.23
VARS-219ENST00000461328 COX4I1P13073 169 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 PTNP21246 168 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 IGHV1-2P23083 117 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 LSP1P33241 339 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 RIPPLY3P57055 190 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 NKX6-1P78426 367 aaPredicted RBP13.59□□□□□ -0.23
VARS-219ENST00000461328 FAPQ12884 760 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 SLC17A1Q14916 467 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 TAB1Q15750 504 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 DUSP7Q16829 419 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 C5orf46Q6UWT4 87 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 AAED1Q7RTV5 226 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 ARPINQ7Z6K5 226 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 CPLX4Q7Z7G2 160 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 P3H2Q8IVL5 708 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 C10orf53Q8N6V4 93 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 GPR32P1Q8NGA4 272 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 MFSD8Q8NHS3 518 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 HSD17B8Q92506 261 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 PROX1Q92786 737 aa13.59□□□□□ -0.23
VARS-219ENST00000461328 KTI12Q96EK9 354 aaPredicted RBP13.59□□□□□ -0.23
VARS-219ENST00000461328 EPYCQ99645 322 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms