RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 FXYD6Q9H0Q3 95 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 POLHQ9Y253 713 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF337Q9Y3M9 751 aa10.73□□□□□ -0.69
NPHP4-204ENST00000460696 IGKV1-8A0A0C4DH67 115 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SHISA7A6NL88 538 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 H3BML4 177 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 BCAT2O15382 392 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 MT-ND4P03905 459 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 NUP62P37198 522 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF101Q8IZC7 436 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SIRT6Q8N6T7 355 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 BMFQ96LC9 184 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ALG12Q9BV10 488 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SDHAF3Q9NRP4 125 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 IL20Q9NYY1 176 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SPTBN4Q9H254 2564 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 CDC42EP2O14613 210 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 KRT33AO76009 404 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 EFEMP2O95967 443 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SEMG1P04279 462 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 CSF3P09919 207 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 JMJD7P0C870 316 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 PNMTP11086 282 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 MYF5P13349 255 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 S1PR1P21453 382 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 KCNAB1Q14722 419 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 QSOX2Q6ZRP7 698 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 FCRLAQ7L513 359 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 MAMDC2Q7Z304 686 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SFTPA2Q8IWL1 248 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 RCBTB1Q8NDN9 531 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 OR2AJ1Q8NGZ0 328 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 HOXD1Q9GZZ0 328 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ATG5Q9H1Y0 275 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 TMEM185BQ9H7F4 350 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 CMC2Q9NRP2 79 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ASB6Q9NWX5 421 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ACACBO00763 2458 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 FAM221BA6H8Z2 402 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ANKRD61A6NGH8 418 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF264O43296 627 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 GTF2F2P13984 249 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 HIST1H1CP16403 213 aaKnown RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ELK1P19419 428 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ART1P52961 327 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 OR10A3P58181 314 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 FAM205BPQ63HN1 556 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 DNM1P34Q6PK57 102 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SLC35D2Q76EJ3 337 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 TSEN54Q7Z6J9 526 aaKnown RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 GLCCI1Q86VQ1 547 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 ADAMTS18Q8TE60 1221 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 TCTN2Q96GX1 697 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 RBP7Q96R05 134 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 STACQ99469 402 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 CMKLR1Q99788 373 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 PPIL3Q9H2H8 161 aaKnown RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 EXO5Q9H790 373 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 GALNT9Q9HCQ5 603 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 FGF20Q9NP95 211 aaPredicted RBP10.72□□□□□ -0.69
NPHP4-204ENST00000460696 LHX9Q9NQ69 397 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 INPP5EQ9NRR6 644 aa10.72□□□□□ -0.69
NPHP4-204ENST00000460696 SELENOFO60613 162 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 TACR3P29371 465 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 CD79BP40259 229 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 RPS27P42677 84 aaKnown RBP10.71□□□□□ -0.69
NPHP4-204ENST00000460696 ZIC1Q15915 447 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 OTPQ5XKR4 325 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 THOC7Q6I9Y2 204 aaKnown RBP10.71□□□□□ -0.69
NPHP4-204ENST00000460696 WBP2NLQ6ICG8 309 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF425Q6IV72 752 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 ESPNLQ6ZVH7 1005 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 GALNTL5Q7Z4T8 443 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 C1orf210Q8IVY1 113 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 CA13Q8N1Q1 262 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 SDR16C5Q8N3Y7 309 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 OR4K17Q8NGC6 315 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 OR2T35Q8NGX2 323 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 CEP76Q8TAP6 659 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 TMEM234Q8WY98 164 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 TSSK2Q96PF2 358 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 ARHGDIGQ99819 225 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 SRRQ9GZT4 340 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 SERINC1Q9NRX5 453 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 CUTCQ9NTM9 273 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 MEIS3P1A6NDR6 274 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF726A6NNF4 738 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 SMLR1H3BR10 107 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 K7EQS6 105 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 SLC16A7O60669 478 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 OR2T7P0C7T2 308 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 STARP49675 285 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 TCEAL6Q6IPX3 200 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 OR2T27Q8NH04 317 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 TCEAL3Q969E4 200 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 ORAI1Q96D31 301 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms