RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 OR52E8Q6IFG1 317 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 UQCC3Q6UW78 93 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 PGAP1Q75T13 922 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 RUFY3Q7L099 469 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 ZNF571Q7Z3V5 609 aaPredicted RBP3.92□□□□□ -1.78
CCDC50-203ENST00000460064 TRPV1Q8NER1 839 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 CHCHD10Q8WYQ3 142 aaPredicted RBP3.92□□□□□ -1.78
CCDC50-203ENST00000460064 UFD1Q92890 307 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 ITFG2Q969R8 447 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 ARHGDIGQ99819 225 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 PAIP2Q9BPZ3 127 aaKnown RBP3.92□□□□□ -1.78
CCDC50-203ENST00000460064 TCHPQ9BT92 498 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 SELENOIQ9C0D9 397 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 ZDHHC11Q9H8X9 412 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 NPTNQ9Y639 398 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 THSD7BQ9C0I4 1608 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 A0A0J9YXY3 114 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 ARHGEF35A5YM69 484 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 OR52A4PA6NMU1 304 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 H0Y8G0 127 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 UBXN8O00124 270 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 AP3B1O00203 1094 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 CASQ2O14958 399 aaPredicted RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 HDAC3O15379 428 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 SERPINA3P01011 423 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 KLK3P07288 261 aaPredicted RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 ZNF853P0CG23 659 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 NPR2P20594 1047 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 SHMT2P34897 504 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 EPS15P42566 896 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 SULT1E1P49888 294 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 CDH4P55283 916 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 RPL23AP62750 156 aaKnown RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 CDK16Q00536 496 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 TGFBR3Q03167 851 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 GBE1Q04446 702 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 KCTD21Q4G0X4 260 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 BOLA3Q53S33 107 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 CARD16Q5EG05 197 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 CCDC183Q5T5S1 534 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 OR2G6Q5TZ20 316 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 C1orf146Q5VVC0 180 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 SCARA5Q6ZMJ2 495 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 C11orf53Q8IXP5 236 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 UBE2J2Q8N2K1 259 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 FAM83FQ8NEG4 500 aaPredicted RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 OR52K2Q8NGK3 314 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 NT5C3BQ969T7 300 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 HIST1H4GQ99525 98 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 MRPL45Q9BRJ2 306 aaKnown RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 ROPN1BQ9BZX4 212 aaPredicted RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 NARFLQ9H6Q4 476 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 VPS37BQ9H9H4 285 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 SH2D2AQ9NP31 389 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 ZMAT5Q9UDW3 170 aaKnown RBP3.91□□□□□ -1.78
CCDC50-203ENST00000460064 KIF25Q9UIL4 384 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 CFAP45Q9UL16 551 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 KIF25-AS1Q9Y6Z4 181 aa3.91□□□□□ -1.78
CCDC50-203ENST00000460064 EIF4G1Q04637 1599 aaKnown RBP3.9□□□□□ -1.78
CCDC50-203ENST00000460064 LINC00854A0A1B0GVQ3 168 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 A6NIZ1 184 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 MMP23AO75900 390 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 IL12AP29459 219 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 RBMXP38159 391 aaKnown RBP3.9□□□□□ -1.79
CCDC50-203ENST00000460064 GSSP48637 474 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 CRYBB1P53674 252 aaPredicted RBP3.9□□□□□ -1.79
CCDC50-203ENST00000460064 ACTR3P61158 418 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 RAP1BP61224 184 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 TIMM10P62072 90 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 SELENOTP62341 195 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 ORC2Q13416 577 aaPredicted RBP3.9□□□□□ -1.79
CCDC50-203ENST00000460064 MICBQ29980 383 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 PARP15Q460N3 678 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 BCL7AQ4VC05 210 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 CAVIN4Q5BKX8 364 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 MARCH8Q5T0T0 291 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 TIGD3Q6B0B8 471 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 C11orf71Q6IPW1 123 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 NANOGNBQ7Z5D8 188 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 TGIF2LYQ8IUE0 185 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 TGIF2LXQ8IUE1 241 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 ERI1Q8IV48 349 aaKnown RBP3.9□□□□□ -1.79
CCDC50-203ENST00000460064 CCDC71LQ8N9Z2 235 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 ZNF740Q8NDX6 193 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 OR2L5Q8NG80 312 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 FAM110BQ8TC76 370 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 DNAJA4Q8WW22 397 aaPredicted RBP3.9□□□□□ -1.79
CCDC50-203ENST00000460064 PHYHIPLQ96FC7 376 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 CMTM7Q96FZ5 175 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 OXGR1Q96P68 337 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 TECTBQ96PL2 329 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 NAT9Q9BTE0 207 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 TRIM62Q9BVG3 475 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 AZI2Q9H6S1 392 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 AIG1Q9NVV5 245 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 ZNF639Q9UID6 485 aa3.9□□□□□ -1.79
CCDC50-203ENST00000460064 IGHV1OR21-1A0A087WYE8 117 aa3.89□□□□□ -1.79
CCDC50-203ENST00000460064 GFYI3L273 518 aa3.89□□□□□ -1.79
CCDC50-203ENST00000460064 HSD17B6O14756 317 aa3.89□□□□□ -1.79
CCDC50-203ENST00000460064 COX7A1P24310 79 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms