RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SLC41A3Q96GZ6 507 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 MPP4Q96JB8 637 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 SFXN2Q96NB2 322 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 NMNAT1Q9HAN9 279 aaPredicted RBP13.97□□□□□ -0.17
SDF4-204ENST00000459994 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 JKAMPQ9P055 326 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 ZNF629Q9UEG4 869 aaPredicted RBP13.97□□□□□ -0.17
SDF4-204ENST00000459994 VDAC3Q9Y277 283 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 HIVEP1P15822 2718 aa13.97□□□□□ -0.17
SDF4-204ENST00000459994 A0A1W2PRQ8 180 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 EEF1E1-BLOC1S5C9J1V9 151 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 CLOCKO15516 846 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 EEF1E1O43324 174 aaKnown RBP13.96□□□□□ -0.17
SDF4-204ENST00000459994 CHP2O43745 196 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 CTAG2O75638 210 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 CST1P01037 141 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 THY1P04216 161 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 H1F0P07305 194 aaKnown RBP13.96□□□□□ -0.17
SDF4-204ENST00000459994 PNMTP11086 282 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 ZNF17P17021 662 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 TACR3P29371 465 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 APOBEC1P41238 236 aaKnown RBP13.96□□□□□ -0.17
SDF4-204ENST00000459994 KIR2DL3P43628 341 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 POLR2HP52434 150 aaKnown RBP13.96□□□□□ -0.17
SDF4-204ENST00000459994 MAP2K6P52564 334 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 SUCLG1P53597 346 aaKnown RBP13.96□□□□□ -0.17
SDF4-204ENST00000459994 CDH12P55289 794 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 DGCR6Q14129 220 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 TRAM2Q15035 370 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 ALG10BQ5I7T1 473 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 LINC00114Q6XXX2 140 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 UBQLNLQ8IYU4 475 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 LINC01560Q8TB33 94 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 POC1BQ8TC44 478 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 SLC38A4Q969I6 547 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 INTS12Q96CB8 462 aaKnown RBP13.96□□□□□ -0.17
SDF4-204ENST00000459994 CTPS2Q9NRF8 586 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 ZNF337Q9Y3M9 751 aa13.96□□□□□ -0.17
SDF4-204ENST00000459994 A0A087WUJ7 227 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 FAM221AA4D161 298 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 LINC01387J3KSC0 135 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 MGRN1O60291 552 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 CHMP24386 653 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 ELK4P28324 431 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 RRM2P31350 389 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 DNAJA1P31689 397 aaKnown RBP13.95□□□□□ -0.18
SDF4-204ENST00000459994 SPIBQ01892 262 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 MERTKQ12866 999 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 FOXF1Q12946 379 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 RIPK1Q13546 671 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 LUZP2Q86TE4 346 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 ADGRG3Q86Y34 549 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 LRTOMTQ8WZ04 291 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 UCN2Q96RP3 112 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 PRSS27Q9BQR3 290 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 PIGQQ9BRB3 760 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 BDH2Q9BUT1 245 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 DCLRE1BQ9H816 532 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 REEP1Q9H902 201 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 MAN2C1Q9NTJ4 1040 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 RHCGQ9UBD6 479 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 SLC7A7Q9UM01 511 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 TESMINQ9Y4I5 508 aa13.95□□□□□ -0.18
SDF4-204ENST00000459994 ANKHD1Q8IWZ3 2542 aaKnown RBP13.95□□□□□ -0.18
SDF4-204ENST00000459994 TMED7-TICAM2A0A0A6YYA0 188 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 OR2M5A3KFT3 312 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 RCBTB2O95199 551 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 GADD45GO95257 159 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 CXCR1P25024 350 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 FKBP2P26885 142 aaKnown RBP13.94□□□□□ -0.18
SDF4-204ENST00000459994 LIMS1P48059 325 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 PRRC2AP48634 2157 aaKnown RBP13.94□□□□□ -0.18
SDF4-204ENST00000459994 CLDN20P56880 219 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 RAET1LQ5VY80 246 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 LILRA2Q8N149 483 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 PQLC1Q8N2U9 271 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 CENPNQ96H22 339 aaPredicted RBP13.94□□□□□ -0.18
SDF4-204ENST00000459994 ZNF845Q96IR2 970 aaPredicted RBP13.94□□□□□ -0.18
SDF4-204ENST00000459994 HS6ST2Q96MM7 605 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 EPYCQ99645 322 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 PKP2Q99959 881 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 FUZQ9BT04 418 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 ZNF426Q9BUY5 554 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 POLDIP3Q9BY77 421 aaKnown RBP13.94□□□□□ -0.18
SDF4-204ENST00000459994 NTN4Q9HB63 628 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 SERINC1Q9NRX5 453 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 TMED7Q9Y3B3 224 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
SDF4-204ENST00000459994 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
SDF4-204ENST00000459994 A6NNC1 897 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 H3BML4 177 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 TNFRSF11BO00300 401 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 GNGT2O14610 69 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 SEC14L5O43304 696 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 ZNF208O43345 1280 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 EFNA2O43921 213 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 TNFSF13O75888 250 aa13.93□□□□□ -0.18
SDF4-204ENST00000459994 ANPEPP15144 967 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms