RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 GPAT3Q53EU6 434 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 AWAT1Q58HT5 328 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 GKAP1Q5VSY0 366 aaPredicted RBP6.84□□□□□ -1.31
HPS4-207ENST00000459918 KRT80Q6KB66 452 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 NIPAL3Q6P499 406 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 ANKRD16Q6P6B7 361 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 RBMS3Q6XE24 437 aaKnown RBP6.84□□□□□ -1.31
HPS4-207ENST00000459918 OLIG3Q7RTU3 272 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 CDK20Q8IZL9 346 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 OR9K2Q8NGE7 335 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 CLDND2Q8NHS1 167 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 MRPL24Q96A35 216 aaKnown RBP6.84□□□□□ -1.31
HPS4-207ENST00000459918 C1orf50Q9BV19 199 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 TAPBPLQ9BX59 468 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 CRLF2Q9HC73 371 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 DDX28Q9NUL7 540 aaKnown RBP6.84□□□□□ -1.31
HPS4-207ENST00000459918 GPATCH2Q9NW75 528 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 TREM2Q9NZC2 230 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 GMPR2Q9P2T1 348 aaKnown RBP6.84□□□□□ -1.31
HPS4-207ENST00000459918 ATP6V1HQ9UI12 483 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 TRAPPC4Q9Y296 219 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 TMED7Q9Y3B3 224 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 WDR45Q9Y484 360 aa6.84□□□□□ -1.31
HPS4-207ENST00000459918 LOC105371242A0A075B767 164 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 A0A1W2PPW3 197 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 NPIPB8E9PQR5 432 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 G3V2L1 256 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 LSM1O15116 133 aaKnown RBP6.83□□□□□ -1.32
HPS4-207ENST00000459918 PEX11AO75192 247 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 AKR7A3O95154 331 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 AGR2O95994 175 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TFP02787 698 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 FAM153BP0C7A2 387 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 CPA3P15088 417 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TCN1P20061 433 aaPredicted RBP6.83□□□□□ -1.32
HPS4-207ENST00000459918 CXCR1P25024 350 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TACR3P29371 465 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 CALCRP30988 508 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 PGM1P36871 562 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 RIN1Q13671 783 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 CEACAM7Q14002 265 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 DAG1Q14118 895 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 SLC17A1Q14916 467 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 ZNF141Q15928 474 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 CCDC153Q494R4 210 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 ATP6AP1LQ52LC2 224 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 EXOSC6Q5RKV6 272 aaKnown RBP6.83□□□□□ -1.32
HPS4-207ENST00000459918 PRR31Q5SQ13 230 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 EMBQ6PCB8 327 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 PAQR6Q6TCH4 344 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 SHISA2Q6UWI4 295 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TIFABQ6ZNK6 161 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 CLEC4FQ8N1N0 589 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 NATD1Q8N6N6 113 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 FNDC5Q8NAU1 212 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 NUP37Q8NFH4 326 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 MGARPQ8TDB4 240 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 ACMSDQ8TDX5 336 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TWIST2Q8WVJ9 160 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 XAGE5Q8WWM1 108 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 PMM1Q92871 262 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TMEM45BQ96B21 275 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 PPP3R2Q96LZ3 170 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 ZNF385AQ96PM9 386 aaKnown RBP6.83□□□□□ -1.32
HPS4-207ENST00000459918 SLC6A7Q99884 636 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 DUSP26Q9BV47 211 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 OR51I1Q9H343 314 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 SERHL2Q9H4I8 314 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 ZNF442Q9H7R0 627 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 SEC61A2Q9H9S3 476 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 TNFRSF12AQ9NP84 129 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 OXSMQ9NWU1 459 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 PSMC3IPQ9P2W1 217 aaPredicted RBP6.83□□□□□ -1.32
HPS4-207ENST00000459918 CMAHPQ9Y471 501 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 SPEF1Q9Y4P9 236 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 CCL27Q9Y4X3 112 aa6.83□□□□□ -1.32
HPS4-207ENST00000459918 NUP214P35658 2090 aaPredicted RBP6.82□□□□□ -1.32
HPS4-207ENST00000459918 TRAV20A0A0B4J274 112 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 A0A0G2JK05 382 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 A0A0G2JMP0 313 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 A0A0X1KG70 313 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 TMEM72A0PK05 275 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 AP3D1O14617 1153 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 TMPRSS2O15393 492 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 ZNF208O43345 1280 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 RIPK2O43353 540 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 LYPLA1O75608 230 aaPredicted RBP6.82□□□□□ -1.32
HPS4-207ENST00000459918 CELA3BP08861 270 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 ANPEPP15144 967 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 ACHEP22303 614 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 CHI3L1P36222 383 aaPredicted RBP6.82□□□□□ -1.32
HPS4-207ENST00000459918 CCT5P48643 541 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 SELENOPP49908 381 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 KHKP50053 298 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 SH3BGRP55822 239 aaPredicted RBP6.82□□□□□ -1.32
HPS4-207ENST00000459918 HBA1P69905 142 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 H3F3AP84243 136 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 GALK2Q01415 458 aa6.82□□□□□ -1.32
HPS4-207ENST00000459918 ROR2Q01974 943 aaKnown RBP6.82□□□□□ -1.32
HPS4-207ENST00000459918 FOXL1Q12952 345 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms