RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TUBA1CQ9BQE3 449 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 OR11A1Q9GZK7 315 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 NRIP3Q9NQ35 241 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 SERINC1Q9NRX5 453 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 SPIN1Q9Y657 262 aaPredicted RBP22.08■■□□□ 1.13
U2AF1-204ENST00000459639 ARPC3O15145 178 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 IFNGP01579 166 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 HK1P19367 917 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 SDHBP21912 280 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 DSCR4P56555 118 aaPredicted RBP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 SOX8P57073 446 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 ST3GAL4Q11206 333 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 GXYLT1Q4G148 440 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 SLC35F1Q5T1Q4 408 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 CXXC5Q7LFL8 322 aaKnown RBP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 GALNT16Q8N428 558 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 MOSPD2Q8NHP6 518 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 RFKQ969G6 155 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 ERMAPQ96PL5 475 aaPredicted RBP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 UTP23Q9BRU9 249 aaKnown RBP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 TIMMDC1Q9NPL8 285 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 HINT3Q9NQE9 182 aaKnown RBP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 LRFN1Q9P244 771 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 SLC6A5Q9Y345 797 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 TRABD2BA6NFA1 517 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 ARGFXA6NJG6 315 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 G3V3Y1 287 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 BLOC1S5-TXNDC5H3BN57 136 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 IDH3BO43837 385 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 ZNF3P17036 446 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 NOS3P29474 1203 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 AQP2P41181 271 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 EMX1Q04741 257 aaPredicted RBP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 CLN3Q13286 438 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 PMS2P3Q13401 168 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 TUBA3CQ13748 450 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.07■■□□□ 1.12
U2AF1-204ENST00000459639 FOXB2Q5VYV0 432 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 C3orf33Q6P1S2 294 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 TUBA3EQ6PEY2 450 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 GPR141Q7Z602 305 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 IGFN1Q86VF2 1251 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 LRRC75AQ8NAA5 344 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 POTEKPQ9BYX7 375 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 KLHL21Q9UJP4 597 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 MED13Q9UHV7 2174 aa22.07■■□□□ 1.12
U2AF1-204ENST00000459639 SHISA8B8ZZ34 492 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 CBR3O75828 277 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 STSP08842 583 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 APEHP13798 732 aaKnown RBP22.06■■□□□ 1.12
U2AF1-204ENST00000459639 DPP4P27487 766 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 TTKP33981 857 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 CD96P40200 585 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 RPL18Q07020 188 aaKnown RBP22.06■■□□□ 1.12
U2AF1-204ENST00000459639 SRSF6Q13247 344 aaKnown RBP22.06■■□□□ 1.12
U2AF1-204ENST00000459639 MFSD13AQ14CX5 517 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 SGCBQ16585 318 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 CRTC2Q53ET0 693 aaPredicted RBP22.06■■□□□ 1.12
U2AF1-204ENST00000459639 ALG10Q5BKT4 473 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 BORAQ6PGQ7 559 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 GID4Q8IVV7 300 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 OR5J2Q8NH18 312 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 MUL1Q969V5 352 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 TMIGD2Q96BF3 282 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 TAPBPLQ9BX59 468 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 MRPS18AQ9NVS2 196 aaKnown RBP22.06■■□□□ 1.12
U2AF1-204ENST00000459639 IER3IP1Q9Y5U9 82 aa22.06■■□□□ 1.12
U2AF1-204ENST00000459639 PTPRZ1P23471 2315 aaPredicted RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 IRGMA1A4Y4 181 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 DCDC2BA2VCK2 349 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 FTCDNL1E5RQL4 147 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 M0R3G1 203 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 NKX2-8O15522 239 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 FKBP2P26885 142 aaKnown RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 DNASE1L1P49184 302 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 CDH11P55287 796 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 SELENBP1Q13228 472 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 TBCEQ15813 527 aaPredicted RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 ZNF362Q5T0B9 420 aaPredicted RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 CPOQ8IVL8 374 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 GTPBP8Q8N3Z3 284 aaPredicted RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 MFSD8Q8NHS3 518 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 SLC25A43Q8WUT9 341 aaPredicted RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 SLC25A36Q96CQ1 311 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 JSRP1Q96MG2 331 aaPredicted RBP22.05■■□□□ 1.12
U2AF1-204ENST00000459639 GNRHR2Q96P88 292 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 KATNB1Q9BVA0 655 aa22.05■■□□□ 1.12
U2AF1-204ENST00000459639 A0A0G2JMM0 328 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 A0A1W2PPB8 328 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 A0A1W2PRS3 328 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 KIR3DP1A8MWS1 328 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 EFNA2O43921 213 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 FADS2O95864 444 aaKnown RBP22.04■■□□□ 1.12
U2AF1-204ENST00000459639 CD14P08571 375 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 C21orf33P30042 268 aaPredicted RBP22.04■■□□□ 1.12
U2AF1-204ENST00000459639 RAB39AQ14964 217 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 GTF2IRD2BQ6EKJ0 949 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 GTF2IRD2Q86UP8 949 aa22.04■■□□□ 1.12
U2AF1-204ENST00000459639 FAR1Q8WVX9 515 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms