RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ADAM11O75078 769 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 WBP4O75554 376 aaKnown RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 NDUFB2O95178 105 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 MT-ATP6P00846 226 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 TP53P04637 393 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 PIPP12273 146 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 WT1P19544 449 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 MAKP20794 623 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 PAICSP22234 425 aaKnown RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 APOBEC1P41238 236 aaKnown RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 EIF1P41567 113 aaKnown RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 SLC35A2P78381 396 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 TGIF1Q15583 401 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 TMEM236Q5W0B7 351 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 SLC22A10Q63ZE4 541 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 H3F3CQ6NXT2 135 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 ISLR2Q6UXK2 745 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 Q6ZPB1 254 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 PRSS48Q7RTY5 328 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 GPR141Q7Z602 305 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 DTX1Q86Y01 620 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 KIF18BQ86Y91 864 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 CCDC71Q8IV32 467 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 GID4Q8IVV7 300 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 STX19Q8N4C7 294 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 C10orf53Q8N6V4 93 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 TCEANCQ8N8B7 351 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 CLEC1AQ8NC01 280 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 OR10G3Q8NGC4 313 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 OR6S1Q8NH40 331 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 C9orf43Q8TAL5 461 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 TMEM163Q8TC26 289 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 STK35Q8TDR2 534 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 GPR119Q8TDV5 335 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 NKD1Q969G9 470 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 MRGPRX4Q96LA9 322 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 GPA33Q99795 319 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 MESP1Q9BRJ9 268 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 COPS4Q9BT78 406 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 IFT27Q9BW83 186 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 CCDC90BQ9GZT6 254 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 DSN1Q9H410 356 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 DUSP21Q9H596 190 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 EGLN3Q9H6Z9 239 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 FKRPQ9H9S5 495 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 MEPEQ9NQ76 525 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 NANSQ9NR45 359 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 SERINC1Q9NRX5 453 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 ZNF226Q9NYT6 803 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 H2AFY2Q9P0M6 372 aaPredicted RBP8.12□□□□□ -1.11
VPS50-207ENST00000458530 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.12□□□□□ -1.11
VPS50-207ENST00000458530 SIGLEC7Q9Y286 467 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 SLC6A5Q9Y345 797 aa8.12□□□□□ -1.11
VPS50-207ENST00000458530 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 TMED7-TICAM2A0A0A6YYA0 188 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 LOC101059948A0A1B0GTJ6 334 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 DPPA5A6NC42 116 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 CLCA1A8K7I4 914 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 A8MVM7 634 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 PTGES3LE9PB15 166 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 CDC42EP2O14613 210 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 GNB5O14775 395 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 IDH3BO43837 385 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 XPNPEP2O43895 674 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 SUSD5O60279 629 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 LILRA1O75019 489 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 SNX4O95219 450 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 AHSA1O95433 338 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 P04436 131 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 TFAP2AP05549 437 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ZNF3P17036 446 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 JUNBP17275 347 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 GABRB1P18505 474 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 GTF2E2P29084 291 aaKnown RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 NOS3P29474 1203 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 CASP3P42574 277 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ALDH3B2P48448 385 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 MASP1P48740 699 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 GAS1P54826 345 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 CDH15P55291 814 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 SH3BGRP55822 239 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 DLX5P56178 289 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 IL10RAQ13651 578 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ATP1A4Q13733 1029 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 TUBA3CQ13748 450 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 KLHL22Q53GT1 634 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 CLEC12AQ5QGZ9 265 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ARMC4Q5T2S8 1044 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 ABHD17BQ5VST6 288 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 BORAQ6PGQ7 559 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 IL20RBQ6UXL0 311 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 DPY19L2P2Q6ZN68 376 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 KCTD8Q6ZWB6 473 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 AHSA2Q719I0 299 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 MAMDC2Q7Z304 686 aaPredicted RBP8.11□□□□□ -1.11
VPS50-207ENST00000458530 NANOGNBQ7Z5D8 188 aa8.11□□□□□ -1.11
VPS50-207ENST00000458530 LNX2Q8N448 690 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms