RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PSMB1P20618 241 aaKnown RBP16.54■□□□□ 0.24
USP39-209ENST00000458268 DNASE1P24855 282 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 ART1P52961 327 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 FAPQ12884 760 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 SFRP5Q5T4F7 317 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 Q6ZT83 130 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 RBM45Q8IUH3 476 aaKnown RBP16.54■□□□□ 0.24
USP39-209ENST00000458268 RP9Q8TA86 221 aaKnown RBP16.54■□□□□ 0.24
USP39-209ENST00000458268 STK35Q8TDR2 534 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 SLC47A1Q96FL8 570 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 CCM2LQ9NUG4 571 aaPredicted RBP16.54■□□□□ 0.24
USP39-209ENST00000458268 GMPR2Q9P2T1 348 aaKnown RBP16.54■□□□□ 0.24
USP39-209ENST00000458268 UPB1Q9UBR1 384 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 ST6GALNAC2Q9UJ37 374 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 SLC9A8Q9Y2E8 581 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 FLVCR1Q9Y5Y0 555 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 CSMD1Q96PZ7 3565 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 CCDC168Q8NDH2 2452 aa16.54■□□□□ 0.24
USP39-209ENST00000458268 HRNRQ86YZ3 2850 aaPredicted RBP16.53■□□□□ 0.24
USP39-209ENST00000458268 PRR14LQ5THK1 2151 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 IGKV3D-15A0A087WSY6 115 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 CIB4A0PJX0 185 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 DEFB108AA8MXU0 73 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 SLC22A2O15244 555 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
USP39-209ENST00000458268 RAD51DO75771 328 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 PNMTP11086 282 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 TNFRSF1BP20333 461 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 DRD4P21917 467 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 NUDT2P50583 147 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 GZMMP51124 257 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 IST1P53990 364 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 ITGADQ13349 1161 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 KEAP1Q14145 624 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 PDK3Q15120 406 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 ULK3Q6PHR2 472 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 TREML1Q86YW5 311 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 KDM8Q8N371 416 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 OR9K2Q8NGE7 335 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 OR6T1Q8NGN1 323 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 DNAJA4Q8WW22 397 aaPredicted RBP16.53■□□□□ 0.24
USP39-209ENST00000458268 PROX1Q92786 737 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 SLC38A4Q969I6 547 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 HS3ST6Q96QI5 342 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 ARHGDIGQ99819 225 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 SEC14L4Q9UDX3 406 aa16.53■□□□□ 0.24
USP39-209ENST00000458268 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.52■□□□□ 0.24
USP39-209ENST00000458268 A0A1W2PPR1 153 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 GMNCA6NCL1 334 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 AQP7P3A6NL99 342 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 TPST2O60704 377 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 KRT33AO76009 404 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 LGI1O95970 557 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 NPPAP01160 153 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 CDH2P19022 906 aaPredicted RBP16.52■□□□□ 0.24
USP39-209ENST00000458268 CD247P20963 164 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 IGHV1-2P23083 117 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 PCYT1AP49585 367 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 SLC16A1P53985 500 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 CDH12P55289 794 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 H3F3AP84243 136 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 EGR4Q05215 589 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 SLC17A1Q14916 467 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 P2RY6Q15077 328 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 NRF1Q16656 503 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 ERICH5Q6P6B1 374 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 DEF8Q6ZN54 512 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 AAED1Q7RTV5 226 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 CALHM3Q86XJ0 350 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 LURAP1LQ8IV03 231 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 LSMEM1Q8N8F7 131 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 OR2T12Q8NG77 320 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 OR4D11Q8NGI4 311 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 TAAR8Q969N4 342 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 PLPPR2Q96GM1 343 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 ZNF385AQ96PM9 386 aaKnown RBP16.52■□□□□ 0.24
USP39-209ENST00000458268 HDHD5Q9BXW7 423 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 EDARQ9UNE0 448 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 SH3GLB1Q9Y371 365 aa16.52■□□□□ 0.24
USP39-209ENST00000458268 A0A0B4J2E0 115 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 A0A1B0GX12 115 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 A0A1W2PR80 420 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 FAM220BPB1ANY3 271 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 M0R082 166 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 KPNA4O00629 521 aaPredicted RBP16.51■□□□□ 0.23
USP39-209ENST00000458268 GSTA4O15217 222 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 SERPINI2O75830 405 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 GOSR1O95249 250 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 NQO1P15559 274 aaKnown RBP16.51■□□□□ 0.23
USP39-209ENST00000458268 GRPRP30550 384 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 NTF4P34130 210 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 SLC7A2P52569 658 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 TAB1Q15750 504 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 NPTX1Q15818 432 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 BEX5Q5H9J7 111 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 ENTPD8Q5MY95 495 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 FBXW9Q5XUX1 488 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 PAMR1Q6UXH9 720 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 CARM1Q86X55 608 aa16.51■□□□□ 0.23
USP39-209ENST00000458268 MFSD8Q8NHS3 518 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms