RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CTPS2Q9NRF8 586 aa6.21□□□□□ -1.41
ECHDC1-210ENST00000454859 C20orf141Q9NUB4 165 aa6.21□□□□□ -1.41
ECHDC1-210ENST00000454859 B3GALT5Q9Y2C3 310 aa6.21□□□□□ -1.41
ECHDC1-210ENST00000454859 CPAMD8Q8IZJ3 1885 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 C9orf172C9J069 976 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 AKAP8O43823 692 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 INMTO95050 263 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 OR2T7P0C7T2 308 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CEACAM1P13688 526 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CPEP16870 476 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC2A5P22732 501 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 TGM1P22735 817 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 NOS3P29474 1203 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CASP3P42574 277 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 RGS6P49758 472 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CCR4P51679 360 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 SPEM2Q0P670 501 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 SELENBP1Q13228 472 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CTF1Q16619 201 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 HES3Q5TGS1 186 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 C1orf140Q5VVS0 124 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC22A10Q63ZE4 541 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CBLN3Q6UW01 205 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 USP43Q70EL4 1123 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 NANOGNBQ7Z5D8 188 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 ADGRG3Q86Y34 549 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 SYS1Q8N2H4 156 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 KLHL36Q8N4N3 616 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 ACBD7Q8N6N7 88 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 LRRC75AQ8NAA5 344 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 OR13C2Q8NGS9 318 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 OR2T27Q8NH04 317 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 OR5J2Q8NH18 312 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 RNF217Q8TC41 542 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 DUSP19Q8WTR2 217 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 PHYHIPQ92561 330 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 THRSPQ92748 146 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 KIAA1143Q96AT1 154 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 TMIGD2Q96BF3 282 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 TNFRSF13CQ96RJ3 184 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 RNF32Q9H0A6 362 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 SMOC1Q9H4F8 434 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 ZBTB20Q9HC78 741 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 PALMDQ9NP74 551 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 ASB6Q9NWX5 421 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 DNAJC27Q9NZQ0 273 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 KLRF1Q9NZS2 232 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 TNFRSF10DQ9UBN6 386 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 CHCHD2Q9Y6H1 151 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 PCNX2A6NKB5 2137 aa6.21□□□□□ -1.42
ECHDC1-210ENST00000454859 A0A1W2PNV4 684 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 EIF4E1BA6NMX2 242 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 SNPHO15079 494 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 SUSD5O60279 629 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 RAD1O60671 282 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 ITGA10O75578 1167 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 OR2J2O76002 312 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 BCL10O95999 233 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 RENP00797 406 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 CD36P16671 472 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 SDHBP21912 280 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 PSMB9P28065 219 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 ETV5P41161 510 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 CASRP41180 1078 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 PTGDSP41222 190 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 DIO1P49895 249 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 DAP3P51398 398 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 RRADP55042 308 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 DSCR4P56555 118 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 FBXW4P57775 412 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 ROR2Q01974 943 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 TCF15Q12870 199 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 AIMP2Q13155 320 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 PON3Q15166 354 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 DGUOKQ16854 277 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 ALG10Q5BKT4 473 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC16A12Q6ZSM3 486 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 FAM122BQ7Z309 247 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 PLCZ1Q86YW0 608 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 CROCCP3Q8IVE0 287 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 CPOQ8IVL8 374 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 GTPBP8Q8N3Z3 284 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 TMEM156Q8N614 296 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 IQCF1Q8N6M8 205 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 OR2M3Q8NG83 312 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 OR2T4Q8NH00 348 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 S100ZQ8WXG8 99 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 THAP4Q8WY91 577 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 C1GALT1C1Q96EU7 318 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 LMF1Q96S06 567 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 DDOQ99489 341 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 TEAD3Q99594 435 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 ATP13A2Q9NQ11 1180 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 HINT3Q9NQE9 182 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 NDUFB11Q9NX14 153 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 ALKBH4Q9NXW9 302 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 CCDC59Q9P031 241 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 TMEM14AQ9Y6G1 99 aa6.2□□□□□ -1.42
ECHDC1-210ENST00000454859 MPDZO75970 2070 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms