RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 APOBEC1P41238 236 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC1A3P43003 542 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ALDH3B1P43353 468 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CAPZA2P47755 286 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CCT5P48643 541 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 POLR2HP52434 150 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PRPS1P60891 318 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 H3F3AP84243 136 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HOXC5Q00444 222 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SNTB2Q13425 540 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PDK3Q15120 406 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZSWIM7Q19AV6 140 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ALKBH6Q3KRA9 238 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ARHGAP11BQ3KRB8 267 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LSM12Q3MHD2 195 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PRAMEF8Q5VWM4 474 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PRAMEF7Q5VXH5 474 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CARD17Q5XLA6 110 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SAXO2Q658L1 398 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ATG16L1Q676U5 607 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR7E24Q6IFN5 339 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NIPAL3Q6P499 406 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C12orf54Q6X4T0 127 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF836Q6ZNA1 936 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SPATA21Q7Z572 469 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WDFY1Q8IWB7 410 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CADM2Q8N3J6 435 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C17orf78Q8N4C9 275 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MNS1Q8NEH6 495 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C1orf162Q8NEQ5 155 aaPredicted RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR1K1Q8NGR3 316 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 COQ8BQ96D53 544 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MS4A3Q96HJ5 214 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 METTL2AQ96IZ6 378 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TEX37Q96LM6 180 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 USB1Q9BQ65 265 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SYT3Q9BQG1 590 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC35A5Q9BS91 424 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADAM19Q9H013 955 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC38A1Q9H2H9 487 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HHATLQ9HCP6 504 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC6A13Q9NSD5 602 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM181Q9P2C4 612 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MYEF2Q9P2K5 600 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MARCOQ9UEW3 520 aaPredicted RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DCTN4Q9UJW0 460 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC35A3Q9Y2D2 325 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HDGFL3Q9Y3E1 203 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PMF1-BGLAPU3KQ54 211 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ARHGAP32A7KAX9 2087 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WNK1Q9H4A3 2382 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LOC105371242A0A075B767 164 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IGHV2OR16-5A0A0B4J2B6 119 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LOC390937A0A1W2PQ73 354 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WDR91A4D1P6 747 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR6C65A6NJZ3 312 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AQP7P3A6NL99 342 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 H3BQF6 201 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NDUFS8O00217 210 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NPHS1O60500 1241 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NCR1O76036 304 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 STAMBPO95630 424 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WNT11O96014 354 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AK1P00568 194 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HLA-HP01893 362 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CRYAAP02489 173 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADRA2AP08913 450 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 BMP4P12644 408 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IFNGR1P15260 489 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADRA2CP18825 462 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PRPS1L1P21108 318 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CBLP22681 906 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PPOXP50336 477 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 P2RY4P51582 365 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHN2P52757 468 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CDH15P55291 814 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 UBE2NP61088 152 aaKnown RBP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC35A1P78382 337 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KCNJ10P78508 379 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ROR2Q01974 943 aaKnown RBP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TGFBR3Q03167 851 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SQLEQ14534 574 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHI3L2Q15782 390 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADRM1Q16186 407 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GTDC1Q4AE62 458 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ATAD3BQ5T9A4 648 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LIPNQ5VXI9 398 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PAQR6Q6TCH4 344 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RNF165Q6ZSG1 346 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MDP1Q86V88 176 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 COMTD1Q86VU5 262 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 VRK2Q86Y07 508 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IFT20Q8IY31 132 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF781Q8N8C0 355 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TCP10LQ8TDR4 215 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WDR60Q8WVS4 1066 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CKAP2Q8WWK9 683 aa5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GTF3AQ92664 365 aaKnown RBP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TAF15Q92804 592 aaKnown RBP eCLIP5.18□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM45BQ96B21 275 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms