RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 CARD8Q9Y2G2 431 aa16.1■□□□□ 0.17
SQSTM1-204ENST00000453046 C2CD3Q4AC94 2353 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 CENPVL1A0A0U1RR11 272 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 CASQ2O14958 399 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 ADAMDEC1O15204 470 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 ATE1O95260 518 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 MT-ND1P03886 318 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 IL7RP16871 459 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 SLC6A8P48029 635 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 P2RX1P51575 399 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 VLDLRP98155 873 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 FOXF1Q12946 379 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 NRF1Q16656 503 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 DEFB113Q30KQ7 82 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 KLHL26Q53HC5 615 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 GTF2IRD2BQ6EKJ0 949 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 GTF2IRD2Q86UP8 949 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 CARM1Q86X55 608 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 OR6K3Q8NGY3 331 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 POC1BQ8TC44 478 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 LRTOMTQ8WZ04 291 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 OSTF1Q92882 214 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 SLC35B4Q969S0 331 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 ZG16BQ96DA0 208 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 ADGRG7Q96K78 797 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 C7orf34Q96L11 122 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 ARHGDIGQ99819 225 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 KLHL4Q9C0H6 718 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 DNAJB9Q9UBS3 223 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 KCNE5Q9UJ90 142 aa16.09■□□□□ 0.17
SQSTM1-204ENST00000453046 MTORP42345 2549 aa16.08■□□□□ 0.17
SQSTM1-204ENST00000453046 A0A0J9YW62 118 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 LINGO3P0C6S8 592 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 KLK2P20151 261 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 SFTPDP35247 375 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 CARD18P57730 90 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 SESN3P58005 492 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 GUSBP1Q15486 140 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 MAPK14Q16539 360 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 CTU2Q2VPK5 515 aaKnown RBP16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 GLIPR1L2Q4G1C9 344 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 PDZK1Q5T2W1 519 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 MRPL2Q5T653 305 aaKnown RBP16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 CBLN3Q6UW01 205 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 ZNF550Q7Z398 422 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 HMGN2P46Q86SG4 172 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 TMCO5AQ8N6Q1 288 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 PIK3IP1Q96FE7 263 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 CENPNQ96H22 339 aaPredicted RBP16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 ZC3HAV1LQ96H79 300 aaKnown RBP16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 KLHL15Q96M94 604 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 ZNF347Q96SE7 839 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 KLHDC3Q9BQ90 382 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 BDH2Q9BUT1 245 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 TMUB1Q9BVT8 246 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 RSPO3Q9BXY4 272 aaPredicted RBP16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 FANCFQ9NPI8 374 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 TIGARQ9NQ88 270 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 GLRX2Q9NS18 164 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 SH3GLB1Q9Y371 365 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 DTNAQ9Y4J8 743 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 ENPP4Q9Y6X5 453 aa16.08■□□□□ 0.16
SQSTM1-204ENST00000453046 CDHR4A6H8M9 788 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 GJE1A6NN92 205 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 hCG_2039718K7EN88 272 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 CLOCKO15516 846 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 PRSS23O95084 383 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 CST1P01037 141 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 TNFRSF1BP20333 461 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 IL11P20809 199 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 ELK4P28324 431 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 ADH6P28332 368 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 CCR4P51679 360 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 SUMO3P55854 103 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 IQCCQ4KMZ1 466 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 ANKRD34AQ69YU3 496 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 HMBOX1Q6NT76 420 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 STK32CQ86UX6 486 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 COMTD1Q86VU5 262 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 ATP6V1C2Q8NEY4 427 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 TOR1AIP2Q8NFQ8 470 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 ZNF300Q96RE9 604 aaPredicted RBP16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 PLSCR4Q9NRQ2 329 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 NDUFAF4Q9P032 175 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 ICAM5Q9UMF0 924 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 SLC35A3Q9Y2D2 325 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 CHST2Q9Y4C5 530 aa16.07■□□□□ 0.16
SQSTM1-204ENST00000453046 SETD2Q9BYW2 2564 aaPredicted RBP16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 A0A1W2PPR1 153 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 SERINC4A6NH21 518 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 M0R3H8 397 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 OIP5O43482 229 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 SS18L1O75177 396 aaPredicted RBP16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 CYP7B1O75881 506 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 RHCEP18577 417 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 CRYGSP22914 178 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 CCKARP32238 428 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 OR1E2P47887 323 aa16.06■□□□□ 0.16
SQSTM1-204ENST00000453046 RGS8P57771 180 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms