RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 PRR14LQ5THK1 2151 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 ROS1P08922 2347 aa13.46□□□□□ -0.26
CHD3-205ENST00000449744 AQP7P3A6NL99 342 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 ABCD4O14678 606 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 FRS3O43559 492 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 AHSA1O95433 338 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 PAX1P15863 534 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 GTF2E2P29084 291 aaKnown RBP13.45□□□□□ -0.26
CHD3-205ENST00000449744 PRKAR1BP31321 381 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 HOXC5Q00444 222 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 TGFBR3Q03167 851 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 GABRA6Q16445 453 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 TSPO2Q5TGU0 170 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 C9orf135Q5VTT2 229 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 REEP3Q6NUK4 255 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 TMEM108Q6UXF1 575 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 CLEC9AQ6UXN8 241 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 OR9K2Q8NGE7 335 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 STK35Q8TDR2 534 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 RADILQ96JH8 1075 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 MUS81Q96NY9 551 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 PIF1Q9H611 641 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 SLC52A3Q9NQ40 469 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 SLC7A10Q9NS82 523 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 LEF1Q9UJU2 399 aaPredicted RBP13.45□□□□□ -0.26
CHD3-205ENST00000449744 TRIM33Q9UPN9 1127 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 MGAT4BQ9UQ53 548 aa13.45□□□□□ -0.26
CHD3-205ENST00000449744 FLNAP21333 2647 aaKnown RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 A0A1W2PR80 420 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 ELOA3DA6NLF2 546 aaPredicted RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 SMAD7O15105 426 aaKnown RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 KRT33AO76009 404 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 VAMP5O95183 116 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 ITGA5P08648 1049 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 SLC6A2P23975 617 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 ZNF83P51522 516 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 FOXG1P55316 489 aaPredicted RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 SCARB2Q14108 478 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 ELOA3BQ3SY89 546 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 Q71RC1 249 aaPredicted RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 ABHD12BQ7Z5M8 362 aaPredicted RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 ELOA3Q8NG57 546 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 STON2Q8WXE9 905 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 SLC25A36Q96CQ1 311 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 COX4I2Q96KJ9 171 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 ZNF385AQ96PM9 386 aaKnown RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 ZNF607Q96SK3 696 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 TRIM2Q9C040 744 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 ALG2Q9H553 416 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 FAIMQ9NVQ4 179 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
CHD3-205ENST00000449744 NPAP1Q9NZP6 1156 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 SLC13A4Q9UKG4 626 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 POU2F3Q9UKI9 436 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 SLC25A15Q9Y619 301 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 GMEB1Q9Y692 573 aa13.44□□□□□ -0.26
CHD3-205ENST00000449744 TRBV5-3A0A0A0MS03 114 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 PRORSD1PA6NEY8 169 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 TRIM64A6NGJ6 449 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 TRIM64BA6NI03 449 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 TMEM229AB2RXF0 380 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 M0R1B8 84 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 ANGPT2O15123 496 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 SOD3P08294 240 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 DANCRP0C864 163 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 HOXB4P17483 251 aaPredicted RBP13.43□□□□□ -0.26
CHD3-205ENST00000449744 GPX2P18283 190 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 PTAFRP25105 342 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 MPGP29372 298 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 RPS5P46782 204 aaKnown RBP13.43□□□□□ -0.26
CHD3-205ENST00000449744 CDH11P55287 796 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 NCALDP61601 193 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 LTBQ06643 244 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 DHRS4L2Q6PKH6 230 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 DEPDC4Q8N2C3 294 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 C10orf111Q8N326 155 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 CIARTQ8N365 385 aaPredicted RBP13.43□□□□□ -0.26
CHD3-205ENST00000449744 C17orf78Q8N4C9 275 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
CHD3-205ENST00000449744 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 SIKE1Q9BRV8 207 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 SLCO5A1Q9H2Y9 848 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 TMEM38AQ9H6F2 299 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 C12orf10Q9HB07 376 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 NPHS2Q9NP85 383 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 SELENONQ9NZV5 590 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 ANGPT4Q9Y264 503 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 RASD1Q9Y272 281 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 AMDHD2Q9Y303 409 aa13.43□□□□□ -0.26
CHD3-205ENST00000449744 MAGED1Q9Y5V3 778 aaPredicted RBP13.43□□□□□ -0.26
CHD3-205ENST00000449744 SHISA9B4DS77 424 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 PDLIM1O00151 329 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 NPIPB7O75200 414 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 SERPINB7O75635 380 aa13.42□□□□□ -0.26
CHD3-205ENST00000449744 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms