RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 XPNPEP2O43895 674 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 MT-ND2P03891 347 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 CELA3AP09093 270 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 CNR1P21554 472 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 TGFBR2P37173 567 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 CTAG1AP78358 180 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 PLAURQ03405 335 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 FLYWCH1Q4VC44 716 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 FAM122CQ6P4D5 195 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 SPATC1Q76KD6 591 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 WDSUB1Q8N9V3 476 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 TMEM178AQ8NBL3 297 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 ZNF540Q8NDQ6 660 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 NFKBIDQ8NI38 313 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 DMRTB1Q96MA1 342 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 TTYH2Q9BSA4 534 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 ANGPTL4Q9BY76 406 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 GORASP2Q9H8Y8 452 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 ASF1BQ9NVP2 202 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 FAM166BA8MTA8 275 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 SLC28A2O43868 658 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 FADS2O95864 444 aaKnown RBP8.96□□□□□ -0.98
CCDC171-203ENST00000449575 NR2F1P10589 423 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 GGT1P19440 569 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 MST1P26927 711 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 AQP1P29972 269 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 DCTP40126 519 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 ARMCX4Q5H9R4 360 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 PDZK1Q5T2W1 519 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF614Q8N883 585 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 CNIH3Q8TBE1 160 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 ZFAND1Q8TCF1 268 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF524Q96C55 264 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 CEP19Q96LK0 163 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 EXD2Q9NVH0 621 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 CNIH4Q9P003 139 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 KLF13Q9Y2Y9 288 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-203ENST00000449575 WDR45Q9Y484 360 aa8.96□□□□□ -0.98
CCDC171-203ENST00000449575 MAGED1Q9Y5V3 778 aaPredicted RBP8.96□□□□□ -0.98
CCDC171-203ENST00000449575 ESPL1Q14674 2120 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TTLL8A6PVC2 850 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 hCG_2039718K7EN88 272 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 BET1O15155 118 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 GSTA4O15217 222 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 FAM20BO75063 409 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TRIM3O75382 744 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 STX11O75558 287 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 GCM2O75603 506 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 B3GALNT1O75752 331 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 WISP1O95388 367 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 DBTP11182 482 aaKnown RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 MASP1P48740 699 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 FOXK1P85037 733 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 EFR3AQ14156 821 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 ARMC4Q5T2S8 1044 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 HDDC2Q7Z4H3 204 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 ZFP62Q8NB50 900 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 DNAJB8Q8NHS0 232 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 DUSP19Q8WTR2 217 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 RPL3LQ92901 407 aaKnown RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 SLC47A1Q96FL8 570 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF583Q96ND8 569 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TREX2Q9BQ50 279 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 G6PC3Q9BUM1 346 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TRAF4Q9BUZ4 470 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TTTY12Q9BZ98 90 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 PLSCR3Q9NRY6 295 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 FBXL2Q9UKC9 423 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 PCDHGB3Q9Y5G1 929 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 PCNX1Q96RV3 2341 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 FLNCQ14315 2725 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 A0A1W2PRQ8 180 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 MEIOCA2RUB1 952 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 SUV39H1O43463 412 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 KIAA0513O60268 411 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 ZNF780AO75290 641 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 ARAFP10398 606 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TBXA2RP21731 343 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 MAGEA5P43359 124 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 SLC9A3P48764 834 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 PSMD4P55036 377 aaKnown RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 BPIFB3P59826 476 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 GCNT6Q5T4J0 391 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TIGD3Q6B0B8 471 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 CBLN3Q6UW01 205 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 ZZZ3Q8IYH5 903 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 DND1Q8IYX4 353 aaKnown RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 OR52E4Q8NGH9 312 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 SLC7A6Q92536 515 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 SNAPC3Q92966 411 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 TRNT1Q96Q11 434 aaKnown RBP8.95□□□□□ -0.98
CCDC171-203ENST00000449575 NPAS1Q99742 590 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 FAM173AQ9BQD7 235 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 SAP130Q9H0E3 1048 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 MAGIXQ9H6Y5 334 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 UBQLN4Q9NRR5 601 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 MED11Q9P086 117 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 P2RX2Q9UBL9 471 aa8.95□□□□□ -0.98
CCDC171-203ENST00000449575 RNF6Q9Y252 685 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms