RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PRMT2P55345 433 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 NRG3P56975 720 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 PCBP3P57721 371 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 CHAF1BQ13112 559 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 RPE65Q16518 533 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 DUSP5Q16690 384 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 TCEAL5Q5H9L2 206 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 FAM69AQ5T7M9 428 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 GPR139Q6DWJ6 353 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 TTLL10Q6ZVT0 673 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF248Q8NDW4 579 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 OR2L2Q8NH16 312 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 METTL21AQ8WXB1 218 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 S100PBPQ96BU1 408 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 KCTD12Q96CX2 325 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 DTD2Q96FN9 168 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 SLC38A3Q99624 504 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 VRK1Q99986 396 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 EIF5A2Q9GZV4 153 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 FBXO4Q9UKT5 387 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 COLEC10Q9Y6Z7 277 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 SSC5DA1L4H1 1573 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 COL11A1P12107 1806 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 LRIT2A6NDA9 550 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 D6RAR5 112 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 KCNAB3O43448 404 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 F3P13726 295 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ACTA2P62736 377 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ACTG2P63267 376 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 IL13RA1P78552 427 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 CAMK2DQ13557 499 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 PDE7AQ13946 482 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 TRAM1Q15629 374 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF585AQ6P3V2 769 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ERN2Q76MJ5 926 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 OR6V1Q8N148 313 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 NANPQ8TBE9 248 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 SLC35A4Q96G79 324 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ENKD1Q9H0I2 346 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 PNO1Q9NRX1 252 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 LSM2Q9Y333 95 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 SLC6A5Q9Y345 797 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 TMEM189-UBE2V1I3L0A0 370 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 TNFSF12O43508 249 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 KNG1P01042 644 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF823P16415 610 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 IRF5Q13568 498 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 NFATC4Q14934 902 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 H3F3CQ6NXT2 135 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 TMEM205Q6UW68 189 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 THSD4Q6ZMP0 1018 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 STX12Q86Y82 276 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 VN1R2Q8NFZ6 395 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 SCARB1Q8WTV0 552 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 YIPF5Q969M3 257 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 OR8D2Q9GZM6 311 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 FGF20Q9NP95 211 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 ACKR4Q9NPB9 350 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 TRAV20A0A0B4J274 112 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 SOX1O00570 391 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 FGF18O76093 207 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 NDUFB2O95178 105 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 RENP00797 406 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 NAT2P11245 290 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 FPR3P25089 353 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 ATP5A1P25705 553 aaKnown RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 GUCA1AP43080 201 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 CDK5Q00535 292 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 PRDX1Q06830 199 aaKnown RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 DYRK1AQ13627 763 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 ITPRIPL2Q3MIP1 535 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 OR7E24Q6IFN5 339 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 NIPAL3Q6P499 406 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 ARHGAP11AQ6P4F7 1023 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 DPPA4Q7L190 304 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 GLB1L2Q8IW92 636 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 TSACCQ96A04 125 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 SLC25A44Q96H78 314 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 Q96M85 177 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 INSM2Q96T92 566 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-204ENST00000449510 DPYSL5Q9BPU6 564 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 ZDHHC5Q9C0B5 715 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 FKRPQ9H9S5 495 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 NRIP3Q9NQ35 241 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 CA10Q9NS85 328 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 CYB5R1Q9UHQ9 305 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 HS3ST2Q9Y278 367 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 CA5BQ9Y2D0 317 aa11.46□□□□□ -0.57
UBE3B-204ENST00000449510 RAB19A4D1S5 217 aa11.46□□□□□ -0.58
UBE3B-204ENST00000449510 GPR89AB7ZAQ6 455 aa11.46□□□□□ -0.58
UBE3B-204ENST00000449510 HTR3BO95264 441 aa11.46□□□□□ -0.58
UBE3B-204ENST00000449510 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.58
UBE3B-204ENST00000449510 GPR89BP0CG08 455 aa11.46□□□□□ -0.58
UBE3B-204ENST00000449510 GLI4P10075 376 aa11.46□□□□□ -0.58
UBE3B-204ENST00000449510 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.58
UBE3B-204ENST00000449510 DHCR24Q15392 516 aa11.46□□□□□ -0.58
UBE3B-204ENST00000449510 HENMT1Q5T8I9 393 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms