RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SLC38A4Q969I6 547 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 LRRC58Q96CX6 371 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 KTI12Q96EK9 354 aaPredicted RBP12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 ALPK1Q96QP1 1244 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 ZNF607Q96SK3 696 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 SF3B5Q9BWJ5 86 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 TRIM2Q9C040 744 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 KLHL14Q9P2G3 628 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 MALT1Q9UDY8 824 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 NOSIPQ9Y314 301 aaKnown RBP12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
RTFDC1-204ENST00000449062 UQCRHLA0A096LP55 91 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 LOC100653049A0A140TA62 436 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 SERPINB7O75635 380 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 KRT34O76011 436 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 PLAUP00749 431 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 C8BP07358 591 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 CD247P20963 164 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 CYLC2Q14093 348 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 ACKR1Q16570 336 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 RABL3Q5HYI8 236 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 OTUD3Q5T2D3 398 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 CSPG4Q6UVK1 2322 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 NHLRC1Q6VVB1 395 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 LINC00114Q6XXX2 140 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 CCDC80Q76M96 950 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 ARMC8Q8IUR7 673 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 OR9K2Q8NGE7 335 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 LILRB1Q8NHL6 650 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 DNAJA4Q8WW22 397 aaPredicted RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 TAAR8Q969N4 342 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 TMEM45BQ96B21 275 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 APH1AQ96BI3 265 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 ZNF583Q96ND8 569 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 ARHGDIGQ99819 225 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 MRGBPQ9NV56 204 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 PARPBPQ9NWS1 579 aa12.41□□□□□ -0.42
RTFDC1-204ENST00000449062 A0A087WUJ7 227 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 A0A0B4J2E0 115 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 A0A1B0GX12 115 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 DPRXA6NFQ7 191 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 SLC22A2O15244 555 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 MRPL33O75394 65 aaKnown RBP12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 LYZL6O75951 148 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 VAMP5O95183 116 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 LYPD3O95274 346 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 IGHV3-9P01782 118 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 IL32P24001 234 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 HOXC12P31275 282 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 PCGF2P35227 344 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 LTBQ06643 244 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 KEAP1Q14145 624 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 OR1Q1Q15612 314 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 NPTX1Q15818 432 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 NRF1Q16656 503 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 CYP51A1Q16850 503 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 VMACQ2NL98 169 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 NCMAPQ5T1S8 102 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 FAM91A1Q658Y4 838 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 ADAM5Q6NVV9 412 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 ULK3Q6PHR2 472 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 TSPYL5Q86VY4 417 aaPredicted RBP12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 KRTAP1-3Q8IUG1 177 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 EPHX4Q8IUS5 362 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 SMYD1Q8NB12 490 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 OR8J3Q8NGG0 315 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 OR52E4Q8NGH9 312 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 OR4D11Q8NGI4 311 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 TAMM41Q96BW9 452 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 PLPPR2Q96GM1 343 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 TMUB1Q9BVT8 246 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 EVA1AQ9H8M9 152 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 SLC7A10Q9NS82 523 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 ANGPT4Q9Y264 503 aa12.4□□□□□ -0.42
RTFDC1-204ENST00000449062 ZANQ9Y493 2812 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 DSCAMO60469 2012 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 LOC102725191A0A1B0GVB3 256 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 FMO6PO60774 539 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 THY1P04216 161 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 ITGA5P08648 1049 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 PNMTP11086 282 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 NR1H2P55055 460 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 GABRA6Q16445 453 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 TIMM23BQ5SRD1 257 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 TSPO2Q5TGU0 170 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 CREB3L2Q70SY1 520 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 PATL1Q86TB9 770 aaKnown RBP12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 P2RY8Q86VZ1 359 aa12.39□□□□□ -0.43
RTFDC1-204ENST00000449062 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms