RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 AHSA1O95433 338 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 C8BP07358 591 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 COX4I1P13073 169 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 SLC17A1Q14916 467 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 P2RY6Q15077 328 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 OR1Q1Q15612 314 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 ALG10BQ5I7T1 473 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 CCDC80Q76M96 950 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 TREML1Q86YW5 311 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 STEAP2Q8NFT2 490 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 TMEM27Q9HBJ8 222 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 FLVCR1Q9Y5Y0 555 aa20.93■□□□□ 0.94
VARS-217ENST00000440048 A0A1W2PPR1 153 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 AQP7P3A6NL99 342 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 PNMTP11086 282 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 CD247P20963 164 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 CRYBA2P53672 197 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 NRF1Q16656 503 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 FAM91A1Q658Y4 838 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 ULK3Q6PHR2 472 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 RANBP3LQ86VV4 465 aaPredicted RBP20.92■□□□□ 0.94
VARS-217ENST00000440048 MFSD8Q8NHS3 518 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 SLC26A7Q8TE54 656 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 KISS1RQ969F8 398 aaPredicted RBP20.92■□□□□ 0.94
VARS-217ENST00000440048 APH1AQ96BI3 265 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 S100PBPQ96BU1 408 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 KTI12Q96EK9 354 aaPredicted RBP20.92■□□□□ 0.94
VARS-217ENST00000440048 SLC47A1Q96FL8 570 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 PTDSS2Q9BVG9 487 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 NSRP1Q9H0G5 558 aaKnown RBP20.92■□□□□ 0.94
VARS-217ENST00000440048 PLEKHF2Q9H8W4 249 aa20.92■□□□□ 0.94
VARS-217ENST00000440048 A0A0B4J2E0 115 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 A0A1B0GX12 115 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 GMNCA6NCL1 334 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 FTCDNL1E5RQL4 147 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 AIM2O14862 343 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 MRPL33O75394 65 aaKnown RBP20.91■□□□□ 0.94
VARS-217ENST00000440048 IL32P24001 234 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 RPS5P46782 204 aaKnown RBP20.91■□□□□ 0.94
VARS-217ENST00000440048 P2RY4P51582 365 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 ITGADQ13349 1161 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 ERICH5Q6P6B1 374 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 SLC38A4Q969I6 547 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 PIK3IP1Q96FE7 263 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 MCHR1Q99705 422 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 SELENONQ9NZV5 590 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 ST6GALNAC2Q9UJ37 374 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 SLC9A8Q9Y2E8 581 aa20.91■□□□□ 0.94
VARS-217ENST00000440048 IGKV1D-42A0A075B6H8 117 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 CCT8L1PA6NM43 557 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 SNX3O60493 162 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 CNOT4O95628 575 aaKnown RBP20.9■□□□□ 0.94
VARS-217ENST00000440048 IGHV3-9P01782 118 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 GNGT1P63211 74 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 VEZF1Q14119 521 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 NPTX1Q15818 432 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 FBXW9Q5XUX1 488 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 CPLX4Q7Z7G2 160 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 OR9K2Q8NGE7 335 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 OR4D11Q8NGI4 311 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 OR6T1Q8NGN1 323 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 RNF217Q8TC41 542 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 SLC25A36Q96CQ1 311 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 SF3B5Q9BWJ5 86 aaKnown RBP20.9■□□□□ 0.94
VARS-217ENST00000440048 MYLK2Q9H1R3 596 aa20.9■□□□□ 0.94
VARS-217ENST00000440048 ROS1P08922 2347 aa20.89■□□□□ 0.94
VARS-217ENST00000440048 A0A087WUJ7 227 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 FAM220BPB1ANY3 271 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 DYNC1I1O14576 645 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 KLF4O43474 513 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 FMO6PO60774 539 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 LYZL6O75951 148 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 IGHV1-2P23083 117 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 LOXP28300 417 aaPredicted RBP20.89■□□□□ 0.93
VARS-217ENST00000440048 CDH12P55289 794 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 TESK1Q15569 626 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 TMEM225Q6GV28 225 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 C5orf46Q6UWT4 87 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 CASP12Q6UXS9 341 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 SPNS3Q6ZMD2 512 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 BHLHA15Q7RTS1 189 aaPredicted RBP20.89■□□□□ 0.93
VARS-217ENST00000440048 WFDC8Q8IUA0 241 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 RBM45Q8IUH3 476 aaKnown RBP20.89■□□□□ 0.93
VARS-217ENST00000440048 P3H2Q8IVL5 708 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 UBE2J2Q8N2K1 259 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 ZIC4Q8N9L1 334 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 VANGL1Q8TAA9 524 aaPredicted RBP20.89■□□□□ 0.93
VARS-217ENST00000440048 RASSF5Q8WWW0 418 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 TAAR8Q969N4 342 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 CMTM6Q9NX76 183 aa20.89■□□□□ 0.93
VARS-217ENST00000440048 COX5AP20674 150 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 IST1P53990 364 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 ZNF613Q6PF04 617 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 ARPINQ7Z6K5 226 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 GPAT4Q86UL3 456 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 OR2T12Q8NG77 320 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 NINJ1Q92982 152 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 TMEM45BQ96B21 275 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 HS3ST6Q96QI5 342 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 EFCAB1Q9HAE3 211 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms