RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 DIO1P49895 249 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 AGFG1P52594 562 aaKnown RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 RAD23AP54725 363 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 CLDN20P56880 219 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 CARD18P57730 90 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 RPS4XP62701 263 aaKnown RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 LAPTM4AQ15012 233 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 SGCBQ16585 318 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 OTUD3Q5T2D3 398 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 WLSQ5T9L3 541 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 HBMQ6B0K9 141 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 PAQR6Q6TCH4 344 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 RASSF6Q6ZTQ3 369 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 HIST3H2AQ7L7L0 130 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 P3H2Q8IVL5 708 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 HS3ST5Q8IZT8 346 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 CBR4Q8N4T8 237 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 C10orf53Q8N6V4 93 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 ATP6V1C2Q8NEY4 427 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 HIST1H2ACQ93077 130 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 WDYHV1Q96HA8 205 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 FAM46AQ96IP4 442 aaKnown RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 NAA11Q9BSU3 229 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 TSPAN10Q9H1Z9 355 aaPredicted RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 COQ10BQ9H8M1 238 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
SCLT1-202ENST00000439369 ZNF175Q9Y473 711 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 ORC6Q9Y5N6 252 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 MGAQ8IWI9 3026 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 USP24Q9UPU5 2620 aa11.39□□□□□ -0.59
SCLT1-202ENST00000439369 ZFHX4Q86UP3 3567 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 LOC400499M0QZD8 3231 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 A0A1B0GTH9 108 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 LOC102725191A0A1B0GVB3 256 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 UNC119BA6NIH7 251 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 EIF1AYO14602 144 aaKnown RBP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 EI24O14681 340 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 SEC14L5O43304 696 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 VAMP5O95183 116 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 RCBTB2O95199 551 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 ZNF26P17031 533 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 PRKACGP22612 351 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 IGFBP5P24593 272 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 PEX2P28328 305 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 GRPRP30550 384 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 PTGS2P35354 604 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 GPR4P46093 362 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 STARP49675 285 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 DAPP51397 102 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 OR2B6P58173 313 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 PRPS1P60891 318 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 H3F3AP84243 136 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 RBPJQ06330 500 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 SNCBQ16143 134 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 ZBED5Q49AG3 693 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 C1QL3Q5VWW1 255 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 FBXW10Q5XX13 1052 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 H1FNTQ75WM6 255 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 NANOGNBQ7Z5D8 188 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 OAFQ86UD1 273 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 OR5J2Q8NH18 312 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 OR10D3Q8NH80 312 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 ZPLD1Q8TCW7 415 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 SMPDL3BQ92485 455 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 OSTF1Q92882 214 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 MOGAT1Q96PD6 335 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 CHST11Q9NPF2 352 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 FANCFQ9NPI8 374 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 KRT84Q9NSB2 600 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 ASF1BQ9NVP2 202 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 TMEFF2Q9UIK5 374 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 SIGLEC7Q9Y286 467 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 HIF3AQ9Y2N7 669 aa11.38□□□□□ -0.59
SCLT1-202ENST00000439369 MAGED1Q9Y5V3 778 aaPredicted RBP11.38□□□□□ -0.59
SCLT1-202ENST00000439369 A0A1W2PNR3 127 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 A0A1W2PNV4 684 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 NPIPB13A6NJU9 1138 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 AQP7P3A6NL99 342 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 NPIPB4C9JG80 1138 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 PDLIM1O00151 329 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 SOCS2O14508 198 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 CDC42EP2O14613 210 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 TNFSF11O14788 317 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 WDR1O75083 606 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 SYNGR4O95473 234 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 FCGR2AP12318 317 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 OSMP13725 252 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 GABRA1P14867 456 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 UQCRC1P31930 480 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 PTDSS1P48651 473 aaKnown RBP11.37□□□□□ -0.59
SCLT1-202ENST00000439369 SUCLG1P53597 346 aaKnown RBP11.37□□□□□ -0.59
SCLT1-202ENST00000439369 CLDN15P56746 228 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 ESRRGP62508 458 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 LTBQ06643 244 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 ZP4Q12836 540 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 OR7A5Q15622 319 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms