RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 RAB3BP20337 219 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
NEK1-201ENST00000439128 FNDC8Q8TC99 324 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 UBTD2Q8WUN7 234 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 MRPL15Q9P015 296 aaKnown RBP11.18□□□□□ -0.62
NEK1-201ENST00000439128 POMT2Q9UKY4 750 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 KRBA1A5PL33 1030 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 TNFSF11O14788 317 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 FURINP09958 794 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 C1orf140Q5VVS0 124 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 TCTN3Q6NUS6 607 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 CA13Q8N1Q1 262 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 CCDC71LQ8N9Z2 235 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 OR8H1Q8NGG4 311 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 OR5W2Q8NH69 310 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 SAP130Q9H0E3 1048 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 B3GAT1Q9P2W7 334 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 SLC17A4Q9Y2C5 497 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 DOK2O60496 412 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 HYAL4Q2M3T9 481 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 GLYR1Q49A26 553 aaPredicted RBP11.18□□□□□ -0.62
NEK1-201ENST00000439128 TRMT12Q53H54 448 aaKnown RBP11.18□□□□□ -0.62
NEK1-201ENST00000439128 FBXL4Q9UKA2 621 aa11.18□□□□□ -0.62
NEK1-201ENST00000439128 NME4O00746 187 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 PRICKLE3O43900 615 aaPredicted RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 CXCL13O43927 109 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 PRAMEF4O60810 478 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 KNG1P01042 644 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 IL3RAP26951 378 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 APOBEC1P41238 236 aaKnown RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 EDDM3AQ14507 147 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 GRINAQ7Z429 371 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 APOBEC4Q8WW27 367 aaKnown RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 C3orf30Q96M34 536 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 DMRTB1Q96MA1 342 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 BIRC8Q96P09 236 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 TBCCD1Q9NVR7 557 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 HHLA2Q9UM44 414 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 TRAV18A0A075B6X5 111 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 A0A0A6YYH2 397 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 A6NJ64 397 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SERPINE2P07093 398 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 PAX7P23759 505 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 EVI2BP34910 448 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SPOCK1Q08629 439 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 RNASE10Q5GAN6 216 aaKnown RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 STEAP3Q658P3 488 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 NPSR1Q6W5P4 371 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 MAML2Q8IZL2 1156 aaPredicted RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 FBXL14Q8N1E6 418 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SYT11Q9BT88 431 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 CTSFQ9UBX1 484 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 STEAP1Q9UHE8 339 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 B3GNT3Q9Y2A9 372 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 CORINQ9Y5Q5 1042 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 LRP5O75197 1615 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 TRAV6A0A075B6T7 132 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 TRGV5A0A0B4J1U4 118 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 D6RAR5 112 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SNNO75324 88 aaPredicted RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 STT3AP46977 705 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 MTCP1P56278 107 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 ZMAT1Q5H9K5 638 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 TMEM211Q6ICI0 200 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SLC35F3Q8IY50 421 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 BEST3Q8N1M1 668 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 RFT1Q96AA3 541 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SLC25A18Q9H1K4 315 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 FKBP14Q9NWM8 211 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 COL18A1P39060 1754 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 DOCK2Q92608 1830 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 PIGBOS1A0A0B4J2F0 54 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 PRKNO60260 465 aaPredicted RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 EIF4E2O60573 245 aaKnown RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 PET100P0DJ07 73 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 NFYBP25208 207 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 UGT8Q16880 541 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 EXOSC6Q5RKV6 272 aaKnown RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 OR5J2Q8NH18 312 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 KISS1RQ969F8 398 aaPredicted RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 ELP4Q96EB1 424 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 METTL9Q9H1A3 318 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 SYNPO2LQ9H987 977 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
NEK1-201ENST00000439128 C14orf119Q9NWQ9 140 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 TMEM181Q9P2C4 612 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 MYOTQ9UBF9 498 aa11.17□□□□□ -0.62
NEK1-201ENST00000439128 A0A096LPE4 126 aa11.16□□□□□ -0.62
NEK1-201ENST00000439128 A0A1W2PNR3 127 aa11.16□□□□□ -0.62
NEK1-201ENST00000439128 A0A1W2PPZ6 126 aa11.16□□□□□ -0.62
NEK1-201ENST00000439128 FAM183AA6NL82 134 aa11.16□□□□□ -0.62
NEK1-201ENST00000439128 GFYI3L273 518 aa11.16□□□□□ -0.62
NEK1-201ENST00000439128 TAPBPO15533 448 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms