RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 VASH2Q86V25 355 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZSCAN30Q86W11 494 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PARGQ86W56 976 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TGIF2LYQ8IUE0 185 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 MISPQ8IVT2 679 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 BCORP1Q8N888 145 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 FNDC8Q8TC99 324 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 HTR3CQ8WXA8 447 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLC25A36Q96CQ1 311 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 C14orf79Q96F83 325 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 SERAC1Q96JX3 654 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 OR5M11Q96RB7 305 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 KCNK16Q96T55 309 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 WRAP53Q9BUR4 548 aaKnown RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 GCOM2Q9BZD3 368 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 MIEF1Q9NQG6 463 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 UTP6Q9NYH9 597 aaKnown RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 ACTR3BQ9P1U1 418 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 ATP6V1HQ9UI12 483 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 FOXJ3Q9UPW0 622 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 MGAT4BQ9UQ53 548 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 KIF25-AS1Q9Y6Z4 181 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 CELSR1Q9NYQ6 3014 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 CSPG4Q6UVK1 2322 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 ATP8B3O60423 1300 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZBED9Q6R2W3 1325 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 MYH8P13535 1937 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 TRBV7-9A0A0J9YWB2 115 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 RNF222A6NCQ9 220 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 E9PMD0 336 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 H3BTX0 84 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 SGK494L7N484 410 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 YKT6O15498 198 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 GPAA1O43292 621 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 VPS26AO75436 327 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 B3GALNT1O75752 331 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 NDUFA7O95182 113 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLC2A10O95528 541 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 APODP05090 189 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 POLR2MP0CAP2 368 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 LIPCP11150 499 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 GABRG2P18507 467 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 CYLC1P35663 651 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 MDH2P40926 338 aaKnown RBP2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 OR1D4P47884 311 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 POLR2FP61218 127 aaKnown RBP2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 NUCB2P80303 420 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 PLOD1Q02809 727 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 HSF2Q03933 536 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 TRIP10Q15642 601 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 GSG1Q2KHT4 349 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 SBK1Q52WX2 424 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 MEDAGQ5VYS4 303 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 CGB2Q6NT52 195 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 SYVN1Q86TM6 617 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 HSCBQ8IWL3 235 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 EFCAB13Q8IY85 973 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 GIPC3Q8TF64 312 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 TMEM158Q8WZ71 300 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 CATSPER2Q96P56 530 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 LZTS2Q9BRK4 669 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 HCAR1Q9BXC0 346 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 TBC1D10AQ9BXI6 508 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 ECT2Q9H8V3 914 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZDHHC4Q9NPG8 344 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 ELOVL2Q9NXB9 296 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 TP53TG5Q9Y2B4 290 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 EXOSC1Q9Y3B2 195 aaKnown RBP2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 COL1A2P08123 1366 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 CCDC168Q8NDH2 2452 aa2.43□□□□□ -2.02
HMGB3P12-201ENST00000438745 LRRK1Q38SD2 2015 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 NIPBLQ6KC79 2804 aaeCLIP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 MYO16Q9Y6X6 1858 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 PLIN4Q96Q06 1357 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 A0A0U1RQV5 110 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 A0A1B0GTQ1 180 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ARL5CA6NH57 179 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 FBLL1A6NHQ2 334 aaKnown RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 FAM74A7A6NL05 159 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 TCP11X1B4DZS4 312 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 WASH3PC4AMC7 463 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 K7EQS6 105 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 JAK2O60674 1132 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 DUSP14O95147 198 aaKnown RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 MBD3O95983 291 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 JCHAINP01591 159 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 GOLGA8HP0CJ92 632 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 CYP2F1P24903 491 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 FASP25445 335 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 GABRR2P28476 465 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 DLSTP36957 453 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 TNFSF9P41273 254 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 PTGFRP43088 359 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 QARSP47897 775 aaKnown RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ALDH3B2P48448 385 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 ARRB1P49407 418 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLC26A2P50443 739 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 GPC3P51654 580 aa2.42□□□□□ -2.02
HMGB3P12-201ENST00000438745 RPL10AP62906 217 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms