RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
PTPN7-203ENST00000435759 SLC9A8Q9Y2E8 581 aa11.92□□□□□ -0.5
PTPN7-203ENST00000435759 CHD3Q12873 2000 aaKnown RBP11.91□□□□□ -0.5
PTPN7-203ENST00000435759 LGI1O95970 557 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 F12P00748 615 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-203ENST00000435759 APOBEC3AP31941 199 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-203ENST00000435759 DSCR9P59020 149 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 PRPS1P60891 318 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 HOXC5Q00444 222 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 LOXL1Q08397 574 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-203ENST00000435759 GSTA3Q16772 222 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 CHRFAM7AQ494W8 412 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 RPS26P11Q5JNZ5 115 aaPredicted RBP11.91□□□□□ -0.5
PTPN7-203ENST00000435759 C6orf52Q5T4I8 152 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 ZNF544Q6NX49 715 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 CREB3L2Q70SY1 520 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 GPAT4Q86UL3 456 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 EPHX4Q8IUS5 362 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 CADM2Q8N3J6 435 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 SLC38A5Q8WUX1 472 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 TMEM45BQ96B21 275 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 FBXO17Q96EF6 278 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
PTPN7-203ENST00000435759 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
PTPN7-203ENST00000435759 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 AQP7P3A6NL99 342 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 H7C417 338 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 RFXANKO14593 260 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 FRS3O43559 492 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 UPK3AO75631 287 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 SLC22A3O75751 556 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
PTPN7-203ENST00000435759 GPIP06744 558 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 NUDT7P0C024 238 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 CRATP43155 626 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 SELENOPP49908 381 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 EFNA4P52798 201 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 TUBA1BP68363 451 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 TUBA4AP68366 448 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 GNA13Q14344 377 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 SLC9B1Q4ZJI4 515 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 HHATQ5VTY9 493 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 NXNQ6DKJ4 435 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 TMEM225Q6GV28 225 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 PODNL1Q6PEZ8 512 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 TUBA1AQ71U36 451 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 MAVSQ7Z434 540 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 PEX5LQ8IYB4 626 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 MGARPQ8TDB4 240 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 FAM168AQ92567 244 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-203ENST00000435759 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 SF3B5Q9BWJ5 86 aaKnown RBP11.9□□□□□ -0.5
PTPN7-203ENST00000435759 SEC61A2Q9H9S3 476 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 FKRPQ9H9S5 495 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 ADPRHL2Q9NX46 363 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 AMDHD2Q9Y303 409 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 ANK2Q01484 3957 aa11.9□□□□□ -0.5
PTPN7-203ENST00000435759 A0A096LPE4 126 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 A0A1W2PPZ6 126 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 HDAC3O15379 428 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 NPIPB7O75200 414 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 SNNO75324 88 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-203ENST00000435759 KRT75O95678 551 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 MAP2K6P52564 334 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 VLDLRP98155 873 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 SRSF2Q01130 221 aaKnown RBP11.89□□□□□ -0.51
PTPN7-203ENST00000435759 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 WBP2NLQ6ICG8 309 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 ANKRD16Q6P6B7 361 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 SERPINA11Q86U17 422 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 C17orf78Q8N4C9 275 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-203ENST00000435759 OR1K1Q8NGR3 316 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 FOXN4Q96NZ1 517 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 ZBTB18Q99592 522 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 PRR14Q9BWN1 585 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 TPT1P8Q9HAU6 139 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 THAP1Q9NVV9 213 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 TMEM45AQ9NWC5 275 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 SEC14L4Q9UDX3 406 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 ZNF443Q9Y2A4 671 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-203ENST00000435759 PMF1-BGLAPU3KQ54 211 aa11.89□□□□□ -0.51
PTPN7-203ENST00000435759 DSPPQ9NZW4 1301 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 A8MVM7 634 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 PHF1O43189 567 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-203ENST00000435759 IFNA2P01563 188 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 IL6P05231 212 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 BCHEP06276 602 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 SLC25A16P16260 332 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 USF1P22415 310 aaPredicted RBP11.88□□□□□ -0.51
PTPN7-203ENST00000435759 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
PTPN7-203ENST00000435759 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
PTPN7-203ENST00000435759 EGR4Q05215 589 aa11.88□□□□□ -0.51
PTPN7-203ENST00000435759 CHRNB3Q05901 458 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms