RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LATS1O95835 1130 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 CTSLP07711 333 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 LAMP2P13473 410 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 MPGP29372 298 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 FAUP35544 74 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 CAPZA2P47755 286 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 FKBP1BP68106 108 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PLA2G7Q13093 441 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF805Q5CZA5 627 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 UNQ6126/PRO20091Q6UXV3 157 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 MAMSTRQ6ZN01 415 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TMPRSS12Q86WS5 348 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF547Q8IVP9 402 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR4N5Q8IXE1 308 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 KCT2Q8NC54 265 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR1S2Q8NGQ3 325 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 C10orf90Q96M02 699 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC19A3Q9BZV2 496 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TM7SF3Q9NS93 570 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF275Q9NSD4 429 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PCYT1BQ9Y5K3 369 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TO15178 435 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 KCNAB3O43448 404 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 AQP8O94778 261 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 F3P13726 295 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 DPP4P27487 766 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 RPS11P62280 158 aaKnown RBP eCLIP10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CSRP2Q16527 193 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 HFEQ30201 348 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 MRM1Q6IN84 353 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF836Q6ZNA1 936 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 SPAG16Q8N0X2 631 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 TEX19Q8NA77 164 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CPNE2Q96FN4 548 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 GFI1Q99684 422 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 IL21RQ9HBE5 538 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CCSO14618 274 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 AKR7A3O95154 331 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CERS1P27544 350 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 IRF5Q13568 498 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 OR1Q1Q15612 314 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 PWWP2BQ6NUJ5 590 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 NUDT18Q6ZVK8 323 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 RANBP3LQ86VV4 465 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 SVBPQ8N300 66 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 NR4A3Q92570 626 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 RHBGQ9H310 441 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 PLEKHA1Q9HB21 404 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 RASL12Q9NYN1 266 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 PCDHB10Q9UN67 800 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CACNA1CQ13936 2221 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 SCN10AQ9Y5Y9 1956 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 LOC100509620A0A075B734 347 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 TBX19O60806 448 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 ADAMTS4O75173 837 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 SNAPC5O75971 98 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 AIFM1O95831 613 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CSN2P05814 226 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 TYRP1P17643 537 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 ACTC1P68032 377 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 ACTA1P68133 377 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 KRT33BQ14525 404 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 KCNAB1Q14722 419 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 C9orf131Q5VYM1 1079 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 OR2W3Q7Z3T1 314 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 ASPGQ86U10 573 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 GLB1L2Q8IW92 636 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 MS4A4EQ96PG1 132 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 TREM1Q9NP99 234 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 ANKRD10Q9NXR5 420 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CALML5Q9NZT1 146 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 FBXL3Q9UKT7 428 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CDV3Q9UKY7 258 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 CCL26Q9Y258 94 aa10.63□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM272A0A1B0GTI8 110 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 TRAPPC13A5PLN9 417 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 OR14I1A6ND48 311 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 F5H0A9 414 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 LEFTY2O00292 366 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 IMPA2O14732 288 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF254O75437 659 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC25A12O75746 678 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 FBXO45P0C2W1 286 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 CYBAP13498 195 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 PRKAR1BP31321 381 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 LIN54Q6MZP7 749 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM71Q6P5X7 295 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 GAREM2Q75VX8 874 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 CCDC36Q8IYA8 594 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 ACOT4Q8N9L9 421 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 VRK1Q99986 396 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 PRSS27Q9BQR3 290 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 MED31Q9Y3C7 131 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF780BQ9Y6R6 833 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 LRIT2A6NDA9 550 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 CRYBA1P05813 215 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 UBBP0CG47 229 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 UBCP0CG48 685 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 MGMTP16455 207 aa10.62□□□□□ -0.71
HMGCS1-202ENST00000433297 BDKRB2P30411 391 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms