RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 PTPRCAPQ14761 206 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 RAB6CQ53S08 254 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DCST2Q5T1A1 773 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CLEC9AQ6UXN8 241 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 REM2Q8IYK8 340 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PRAP1Q96NZ9 151 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 RAB6CQ9H0N0 254 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 GPSM3Q9Y4H4 160 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PCDHGA2Q9Y5H1 932 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MANBAO00462 879 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 HTR1AP08908 422 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PCMT1P22061 227 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 TUSC1Q2TAM9 212 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MCEMP1Q8IX19 187 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5L2Q8NGL0 311 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CCDC74AQ96AQ1 378 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC41A2Q96JW4 573 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CCDC74BQ96LY2 380 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ALG8Q9BVK2 526 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC17A9Q9BYT1 436 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PLEKHM1Q9Y4G2 1056 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PCDHGA6Q9Y5G7 932 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 BCHEP06276 602 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 HOXD4P09016 255 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 EPHA1P21709 976 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 HRH2P25021 359 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ITGA3P26006 1051 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 AVPR1BP47901 424 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 BIDP55957 195 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 TLE2Q04725 743 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CACNA1EQ15878 2313 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PM20D1Q6GTS8 502 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SH2D5Q6ZV89 423 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC24A5Q71RS6 500 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ISCA2Q86U28 154 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OR9K2Q8NGE7 335 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SAMD10Q9BYL1 202 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 FZD7O75084 574 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CMPK1P30085 196 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ADPRHP54922 357 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SFXN4Q6P4A7 337 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 C14orf80Q86SX3 495 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 HELZP42694 1942 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ANHXE9PGG2 379 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 NSA2O95478 260 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DNASE1L1P49184 302 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DHCR24Q15392 516 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OR2B11Q5JQS5 317 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 FBXL22Q6P050 247 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OR8G5Q8NG78 346 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OR8D4Q8NGM9 314 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CXorf58Q96LI9 332 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 IGSF5Q9NSI5 407 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 LPAR3Q9UBY5 353 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 KLF2Q9Y5W3 355 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 M0R3H8 397 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ADAMTS4O75173 837 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SOX14O95416 240 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OPN1SWP03999 348 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 IQCF3P0C7M6 154 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CAV2P51636 162 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SELENOWP63302 87 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 IL13RA1P78552 427 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MTFR2Q6P444 385 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CBLL1Q75N03 491 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 NUDT9Q9BW91 350 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 NRIP3Q9NQ35 241 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 OR6C2Q9NZP2 312 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DNAJC27Q9NZQ0 273 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MRPS33Q9Y291 106 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PI4KAP42356 2102 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 A0A0D9SEW6 157 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CPSF4LA6NMK7 179 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CTDSPLO15194 276 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 NFATC1O95644 943 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 LIPAP38571 399 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MAP3K8P41279 467 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CARD18P57730 90 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MFGE8Q08431 387 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ALKAL2Q6UX46 152 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 TCTEX1D1Q8N7M0 179 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF248Q8NDW4 579 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DNASE1L2Q92874 299 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 INTS14Q96SY0 518 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 URM1Q9BTM9 101 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MANSC4A6NHS7 340 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DRGXA6NNA5 263 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF195O14628 629 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 EOMESO95936 686 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 GAPDHP04406 335 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 CD68P34810 354 aaPredicted RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 LEMD1Q68G75 181 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 MOB3CQ70IA8 216 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM110BQ8TC76 370 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PHOSPHO2Q8TCD6 241 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 RNF31Q96EP0 1072 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF768Q9H5H4 540 aaKnown RBP7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 FER1L5A0AVI2 2057 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms