RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PYCR1P32322 319 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 ST8SIA6P61647 398 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 ELAVL2Q12926 359 aaKnown RBP14.83□□□□□ -0.04
C9orf3-206ENST00000428313 OR52W1Q6IF63 320 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 UNQ9370/PRO34162Q6UXP9 181 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 LNX2Q8N448 690 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 ARRDC1Q8N5I2 433 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 OR6J1Q8NGC5 347 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 AUTS2Q8WXX7 1259 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 SMPDL3BQ92485 455 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 MALSU1Q96EH3 234 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 WDR34Q96EX3 536 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 TMEM169Q96HH4 297 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 CLCC1Q96S66 551 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 MESP1Q9BRJ9 268 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 UBQLN3Q9H347 655 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 SIRT3Q9NTG7 399 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-206ENST00000428313 ANKRD10Q9NXR5 420 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 MYO10Q9HD67 2058 aa14.83□□□□□ -0.04
C9orf3-206ENST00000428313 ZC3H12DA2A288 527 aaKnown RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 F8VVB4 439 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 F8VWA3 439 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 OIP5O43482 229 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 CTNSO60931 367 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 IFNA10P01566 189 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 CD2P06729 351 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 PRG2P13727 222 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ADH7P40394 386 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 BUD31P41223 144 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 CHAF1BQ13112 559 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 CDK5R1Q15078 307 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 INPP5JQ15735 1006 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 NKPD1Q17RQ9 610 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 PCGF3Q3KNV8 242 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 DNLZQ5SXM8 178 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 RNF219Q5W0B1 726 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ANGPTL5Q86XS5 388 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 SLC30A7Q8NEW0 376 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 GPRC5AQ8NFJ5 357 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 STEAP2Q8NFT2 490 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 OR6K2Q8NGY2 324 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 DUSP19Q8WTR2 217 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 LINC01599Q8WXQ3 324 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 MIB2Q96AX9 1013 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 LRIG1Q96JA1 1093 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 SAMD8Q96LT4 415 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 GFI1Q99684 422 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 TSPAN10Q9H1Z9 355 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 KCNK12Q9HB15 430 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 IL20RAQ9UHF4 553 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 FBXL4Q9UKA2 621 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 NOD1Q9Y239 953 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ETV7Q9Y603 341 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 H7BY64 318 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 SAP18O00422 153 aaKnown RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 FARS2O95363 451 aaKnown RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 SBK2P0C263 348 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 TPT1P13693 172 aaKnown RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 F2RL1P55085 397 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 RPS11P62280 158 aaKnown RBP eCLIP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 NAAAQ02083 359 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 TLE2Q04725 743 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ALKBH1Q13686 389 aaKnown RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 PIP5KL1Q5T9C9 394 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 DRAM2Q6UX65 266 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 KDF1Q8NAX2 398 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 OR10H5Q8NGA6 315 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 AKR7LQ8NHP1 331 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 SUN3Q8TAQ9 357 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 RAB3CQ96E17 227 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ARHGDIGQ99819 225 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 EFCAB11Q9BUY7 163 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ELP3Q9H9T3 547 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 MYOZ1Q9NP98 299 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 UPB1Q9UBR1 384 aa14.82□□□□□ -0.04
C9orf3-206ENST00000428313 ZNF230Q9UIE0 474 aaPredicted RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 POLR2AP24928 1970 aaKnown RBP14.82□□□□□ -0.04
C9orf3-206ENST00000428313 GOLGB1Q14789 3259 aaKnown RBP14.81□□□□□ -0.04
C9orf3-206ENST00000428313 ZNF705EA8MWA4 302 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-206ENST00000428313 GLSO94925 669 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-206ENST00000428313 POP4O95707 220 aaKnown RBP14.81□□□□□ -0.04
C9orf3-206ENST00000428313 SNAI1O95863 264 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-206ENST00000428313 F2P00734 622 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 TGFB1P01137 390 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 CD74P04233 296 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 C1GALT1C1LP0DN25 315 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 SRMP19623 302 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 FRKP42685 505 aaPredicted RBP14.81□□□□□ -0.04
C9orf3-206ENST00000428313 GPR4P46093 362 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 IER5LQ5T953 404 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 MMP21Q8N119 569 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 SLC2A12Q8TD20 617 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 XAGE5Q8WWM1 108 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 NEIL2Q969S2 332 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 SLC35G5Q96KT7 338 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 HSPA12BQ96MM6 686 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 SSX3Q99909 188 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 GPR62Q9BZJ7 368 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 TMEM231Q9H6L2 316 aa14.81□□□□□ -0.04
C9orf3-206ENST00000428313 EXO5Q9H790 373 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms