RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 FAM230AA0A1W2PPH8 454 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 C4orf47A7E2U8 309 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 FAM166BA8MTA8 275 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 MPIG6BO95866 241 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 GPR50Q13585 617 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 RUNX2Q13950 521 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 COL28A1Q2UY09 1125 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 GUSBP11Q6P575 273 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 TMEM205Q6UW68 189 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 BEND4Q6ZU67 534 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 SLC35D2Q76EJ3 337 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 CHDHQ8NE62 594 aaPredicted RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 ALG12Q9BV10 488 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 MOV10Q9HCE1 1003 aaKnown RBP12.81□□□□□ -0.36
RPL28-202ENST00000426763 GSKIPQ9P0R6 139 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 ABRACLQ9P1F3 81 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 COPZ2Q9P299 210 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 PCDHGA10Q9Y5H3 936 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 WDR90Q96KV7 1748 aa12.81□□□□□ -0.36
RPL28-202ENST00000426763 TTC3P53804 2025 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 PIGBOS1A0A0B4J2F0 54 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 ZNF587BE7ETH6 402 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 SMAD9O15198 467 aaKnown RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 KCNK2O95069 426 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 FBXO45P0C2W1 286 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 BMP4P12644 408 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 SPRED1Q7Z699 444 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 FOXRED1Q96CU9 486 aaPredicted RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 CCDC120Q96HB5 630 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 CHST8Q9H2A9 424 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 EBF1Q9UH73 591 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 HIF3AQ9Y2N7 669 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 ANKRD12Q6UB98 2062 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 ZNF593O00488 134 aaPredicted RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 MAB21L1Q13394 359 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 LRRC56Q8IYG6 542 aaPredicted RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 OR4F15Q8NGB8 312 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 FXYD6-FXYD2A0A087WZ82 144 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 H7C1C5 153 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 LGI1O95970 557 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 CD14P08571 375 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 PRPH2P23942 346 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 LCN6P62502 163 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 IL10RAQ13651 578 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 PLCXD3Q63HM9 321 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 SLC25A44Q96H78 314 aaPredicted RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 FXYD6Q9H0Q3 95 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 NDUFAF4Q9P032 175 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 AK6Q9Y3D8 172 aaKnown RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 TRAV18A0A075B6X5 111 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 ISPDA4D126 451 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 MAP2K3P46734 347 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 EIF5AL1Q6IS14 154 aaKnown RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 SPARTQ8N0X7 666 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 BEX2Q9BXY8 128 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 BEX1Q9HBH7 125 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 DNAJB6O75190 326 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 ETHE1O95571 254 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 GNAO1P09471 354 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 MECP2P51608 486 aaKnown RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 SNTB2Q13425 540 aaKnown RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 H1FNTQ75WM6 255 aaPredicted RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 ADGRF3Q8IZF5 1079 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 GGHQ92820 318 aa12.8□□□□□ -0.36
RPL28-202ENST00000426763 CCDC59Q9P031 241 aaKnown RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 ZNF223Q9UK11 482 aaPredicted RBP12.8□□□□□ -0.36
RPL28-202ENST00000426763 ACOT8O14734 319 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 ATP1B3P54709 279 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 LANCL3Q6ZV70 420 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 FAM57BQ71RH2 274 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 C16orf52Q8NHV5 167 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 LRFN1Q9P244 771 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 ZNF175Q9Y473 711 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 MOSPD3O75425 235 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 MT-CO3P00414 261 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SBK3P0C264 359 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 FOXC1Q12948 553 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 RPL22L1Q6P5R6 122 aaKnown RBP12.79□□□□□ -0.36
RPL28-202ENST00000426763 OR5H2Q8NGV7 314 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 GIMAP5Q96F15 307 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 OBP2BQ9NPH6 170 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 RAC2P15153 192 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SLC1A3P43003 542 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 FOXK2Q01167 660 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SH2D5Q6ZV89 423 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SPRED2Q7Z698 418 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SFTPA1Q8IWL2 248 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 KLHL13Q9P2N7 655 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 CHRNA9Q9UGM1 479 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 OR6C70A6NIJ9 312 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 EEF1E1-BLOC1S5C9J1V9 151 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SERPINA5P05154 406 aa12.79□□□□□ -0.36
RPL28-202ENST00000426763 SDHBP21912 280 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms