RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
SMARCC1-202ENST00000425518 FKRPQ9H9S5 495 aa6.92□□□□□ -1.3
SMARCC1-202ENST00000425518 HAO2Q9NYQ3 351 aa6.92□□□□□ -1.3
SMARCC1-202ENST00000425518 HEBP2Q9Y5Z4 205 aa6.92□□□□□ -1.3
SMARCC1-202ENST00000425518 FKBP7Q9Y680 259 aa6.92□□□□□ -1.3
SMARCC1-202ENST00000425518 A0A1W2PPL8 197 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 RPS10-NUDT3A0A1W2PQS6 291 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 PRSS38A1L453 326 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TSPAN4O14817 238 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 BRINP1O60477 761 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 FMO6PO60774 539 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 UGT2B7P16662 529 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ZNF10P21506 573 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 RANBP2P49792 3224 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 PSMA6P60900 246 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ACTA2P62736 377 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ACTG2P63267 376 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 OPCMLQ14982 345 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TMEM69Q5SWH9 247 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ABHD13Q7L211 337 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 OVCH1Q7RTY7 1134 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ZNF511Q8NB15 262 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 CAMKVQ8NCB2 501 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 OR8K3Q8NH51 312 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 SYNPRQ8TBG9 265 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 SLC2A12Q8TD20 617 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 FCAMRQ8WWV6 532 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 RASD2Q96D21 266 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 S100A16Q96FQ6 103 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 SFXN2Q96NB2 322 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 SEMA4CQ9C0C4 833 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 LIN7BQ9HAP6 207 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 IL23AQ9NPF7 189 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 C2orf42Q9NWW7 574 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TAS2R10Q9NYW0 307 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 BAIAP2Q9UQB8 552 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 NUP210Q8TEM1 1887 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 IFITM5A6NNB3 132 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 C4orf47A7E2U8 309 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 BLOC1S5-TXNDC5H3BN57 136 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 L7N2F9 121 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 KHNYNO15037 678 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 PRKNO60260 465 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 CDC123O75794 336 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 DCTDP32321 178 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 LBX1P52954 281 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 CLLU1Q5K131 121 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 FHL5Q5TD97 284 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 DGAT2L6Q6ZPD8 337 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 SLC22A18Q96BI1 424 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TSSK2Q96PF2 358 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 CFHR5Q9BXR6 569 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 KLHL9Q9P2J3 617 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 NUP50Q9UKX7 468 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TEX51A0A1B0GUA7 166 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 OR2W5A6NFC9 320 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ADH1BP00325 375 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 APODP05090 189 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 PROS1P07225 676 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 RPS4Y1P22090 263 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 RAG2P55895 527 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 STPG1Q5TH74 334 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 FAM199XQ6PEV8 388 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 KIRREL2Q6UWL6 708 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 RTL10Q7L3V2 364 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 ZNF761Q86XN6 746 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 MOSPD2Q8NHP6 518 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 NT5CQ8TCD5 201 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 PATE1Q8WXA2 126 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 FAM3CQ92520 227 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 SGTBQ96EQ0 304 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 TRIM2Q9C040 744 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 MKKSQ9NPJ1 570 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 CA10Q9NS85 328 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 C14orf105Q9NVL8 296 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 AKAP7Q9P0M2 348 aaPredicted RBP6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 V9GY05 133 aa6.91□□□□□ -1.3
SMARCC1-202ENST00000425518 OR6C68A6NDL8 312 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ZFPL1O95159 310 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 SIX6O95475 246 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 DIO1P49895 249 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 PGDP52209 483 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 NANOS3P60323 173 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 PPP2CBP62714 309 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 RPS15P62841 145 aaKnown RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 PPP2CAP67775 309 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 PRICKLE4Q2TBC4 344 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 LINC00303Q3SY05 128 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 FAM69AQ5T7M9 428 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 METTL11BQ5VVY1 283 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 ZNF776Q68DI1 518 aaPredicted RBP6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 FCRL6Q6DN72 434 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 TMEM65Q6PI78 240 aa6.9□□□□□ -1.3
SMARCC1-202ENST00000425518 BAIAP2L2Q6UXY1 529 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms