RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ADAM5Q6NVV9 412 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 UBE2J2Q8N2K1 259 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
USB1-202ENST00000423271 APH1AQ96BI3 265 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 LRRC58Q96CX6 371 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 DDIT4LQ96D03 193 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 ADAM19Q9H013 955 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 ESRP2Q9H6T0 727 aaKnown RBP13.4□□□□□ -0.26
USB1-202ENST00000423271 A4GALTQ9NPC4 353 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 NGBQ9NPG2 151 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 NPAP1Q9NZP6 1156 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 LAMP3Q9UQV4 416 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 PLCE1Q9P212 2302 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 DNHD1Q96M86 4753 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 RAD51DO75771 328 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 CNOT4O95628 575 aaKnown RBP13.39□□□□□ -0.27
USB1-202ENST00000423271 SOD3P08294 240 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 ARAFP10398 606 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 UQCRBP14927 111 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 GGT1P19440 569 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 SLC35A1P78382 337 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 RNF220Q5VTB9 566 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 FBXW9Q5XUX1 488 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 NANOGP8Q6NSW7 305 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 ZNF440Q8IYI8 595 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 CADM2Q8N3J6 435 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 PCYOX1LQ8NBM8 494 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 NFKBIDQ8NI38 313 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 USB1Q9BQ65 265 aaKnown RBP13.39□□□□□ -0.27
USB1-202ENST00000423271 CXorf56Q9H5V9 222 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 NANOGQ9H9S0 305 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 ZNF701Q9NV72 531 aaPredicted RBP13.39□□□□□ -0.27
USB1-202ENST00000423271 CALML5Q9NZT1 146 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 TRAPPC4Q9Y296 219 aa13.39□□□□□ -0.27
USB1-202ENST00000423271 TMEM247A6NEH6 219 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 OR5H1A6NKK0 313 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 GPR171O14626 319 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 AIM2O14862 343 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 SMAD7O15105 426 aaKnown RBP13.38□□□□□ -0.27
USB1-202ENST00000423271 DCTN3O75935 186 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 PGM3O95394 542 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 NPPAP01160 153 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 DANCRP0C864 163 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 PAX1P15863 534 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 CDK6Q00534 326 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 LTBQ06643 244 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 BNIP2Q12982 314 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 ADRM1Q16186 407 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 ZNF672Q499Z4 452 aaPredicted RBP13.38□□□□□ -0.27
USB1-202ENST00000423271 RABL3Q5HYI8 236 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 GKAP1Q5VSY0 366 aaPredicted RBP13.38□□□□□ -0.27
USB1-202ENST00000423271 CLEC9AQ6UXN8 241 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 CASP12Q6UXS9 341 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 ANKS4BQ8N8V4 417 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 OR52E4Q8NGH9 312 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 FBXW5Q969U6 566 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 KAT8Q9H7Z6 458 aaKnown RBP13.38□□□□□ -0.27
USB1-202ENST00000423271 GID8Q9NWU2 228 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 FLVCR1Q9Y5Y0 555 aa13.38□□□□□ -0.27
USB1-202ENST00000423271 A0A0G2JPF8 293 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 A0A1W2PR80 420 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 LIPT2A6NK58 231 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 HNRNPCL2B2RXH8 293 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 HNRNPCL3B7ZW38 293 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 C5orf58C9J3I9 102 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 FRS3O43559 492 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 EIF1BO60739 113 aaKnown RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 HNRNPCL1O60812 293 aaKnown RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 MRPL33O75394 65 aaKnown RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 LY6G6DO95868 133 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 THBS1P07996 1170 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 ITGA5P08648 1049 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 HNRNPCL4P0DMR1 293 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 CXCR1P25024 350 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 PRDX6P30041 224 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 IDUAP35475 653 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 ATP5J2P56134 94 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 RPS4XP62701 263 aaKnown RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 FAPQ12884 760 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 CEACAM7Q14002 265 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 LARS2Q15031 903 aaKnown RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 OR7A5Q15622 319 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 CYP51A1Q16850 503 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 WBP2NLQ6ICG8 309 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 NET1Q7Z628 596 aaPredicted RBP13.37□□□□□ -0.27
USB1-202ENST00000423271 SERPINA11Q86U17 422 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 PTOV1Q86YD1 416 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 TMEM99Q8N816 258 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 OR8J3Q8NGG0 315 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 OR52N5Q8NH56 324 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 OR10A6Q8NH74 314 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 BBS10Q8TAM1 723 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 MUCL1Q96DR8 90 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 CMTM5Q96DZ9 223 aa13.37□□□□□ -0.27
USB1-202ENST00000423271 LRRC37BQ96QE4 947 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms