RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 A0A0A6YYJ9 748 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 AGAP5A6NIR3 686 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 OR6C65A6NJZ3 312 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 LIPT2A6NK58 231 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 SLCO1B7G3V0H7 640 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 SKAP2O75563 359 aaPredicted RBP13.36□□□□□ -0.27
DDX56-202ENST00000415758 GPIP06744 558 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 HOXB1P14653 301 aaPredicted RBP13.36□□□□□ -0.27
DDX56-202ENST00000415758 CFPP27918 469 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 IL2RGP31785 369 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 DEF8Q6ZN54 512 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 EIF1ADQ8N9N8 165 aaKnown RBP13.36□□□□□ -0.27
DDX56-202ENST00000415758 NUP37Q8NFH4 326 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 OR4A15Q8NGL6 344 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 EPS8L3Q8TE67 593 aaKnown RBP13.36□□□□□ -0.27
DDX56-202ENST00000415758 ZFAND2BQ8WV99 257 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 NEURL3Q96EH8 262 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 APOPT1Q96IL0 206 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 DOK1Q99704 481 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 PLA2G12AQ9BZM1 189 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 ZNF442Q9H7R0 627 aa13.36□□□□□ -0.27
DDX56-202ENST00000415758 SMIM23A6NLE4 172 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 WIPF1O43516 503 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
DDX56-202ENST00000415758 AKR7A3O95154 331 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 VAMP5O95183 116 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 IGKV3-15P01624 115 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 CECR9P0C854 216 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 DAOP14920 347 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 CALCRP30988 508 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 KHKP50053 298 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 P2RY4P51582 365 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 CDH15P55291 814 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 UBE2NP61088 152 aaKnown RBP13.35□□□□□ -0.27
DDX56-202ENST00000415758 HGFACQ04756 655 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 RIN1Q13671 783 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 CEACAM7Q14002 265 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 GSTA3Q16772 222 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 ANXA8L1Q5VT79 327 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 ZCCHC23Q6ZST2 131 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 VPS37AQ8NEZ2 397 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 TRNT1Q96Q11 434 aaKnown RBP13.35□□□□□ -0.27
DDX56-202ENST00000415758 SLC38A1Q9H2H9 487 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 MTHFD2LQ9H903 347 aaPredicted RBP13.35□□□□□ -0.27
DDX56-202ENST00000415758 PCDHB14Q9Y5E9 798 aa13.35□□□□□ -0.27
DDX56-202ENST00000415758 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 CFAP73A6NFT4 308 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 VSTM5A8MXK1 200 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 ZNF587BE7ETH6 402 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 HMGN4O00479 90 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 KRT33AO76009 404 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 LGI1O95970 557 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 ERCC1P07992 297 aaPredicted RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 PCMT1P22061 227 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 RPS4Y1P22090 263 aaKnown RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 SRP14P37108 136 aaKnown RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 DVL1P1P54792 670 aaPredicted RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 HPCAP84074 193 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 EPS8Q12929 822 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 CASP8Q14790 479 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 OR7A5Q15622 319 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 TMEM225Q6GV28 225 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 CREB3L2Q70SY1 520 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 HMGN2P46Q86SG4 172 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 ANKRD46Q86W74 232 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 ANKK1Q8NFD2 765 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 UBLCP1Q8WVY7 318 aaPredicted RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 TESCQ96BS2 214 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 NELFAQ9H3P2 528 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 SLC17A7Q9P2U7 560 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 MARCOQ9UEW3 520 aaPredicted RBP13.34□□□□□ -0.27
DDX56-202ENST00000415758 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
DDX56-202ENST00000415758 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 NR5A2O00482 541 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 SPRY1O43609 319 aaPredicted RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 CPSF4O95639 269 aaKnown RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 IGFBP1P08833 259 aaPredicted RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 NUDT17P0C025 328 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 UQCRBP14927 111 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 NPR2P20594 1047 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 SELENOPP49908 381 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 TXNL4AP83876 142 aaKnown RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 POU3F1Q03052 451 aaPredicted RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 LGALS3BPQ08380 585 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 GNA13Q14344 377 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 VHLLQ6RSH7 139 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 LRRC74BQ6ZQY2 392 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 GPAT4Q86UL3 456 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 GSPT2Q8IYD1 628 aaKnown RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 ZCCHC24Q8N2G6 241 aaKnown RBP13.33□□□□□ -0.28
DDX56-202ENST00000415758 ANKFN1Q8N957 763 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 WDR60Q8WVS4 1066 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 ANKRD27Q96NW4 1050 aa13.33□□□□□ -0.28
DDX56-202ENST00000415758 SNX18Q96RF0 628 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms