RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GRK1Q15835 563 aa9□□□□□ -0.97
CD44-206ENST00000415148 ISXQ2M1V0 245 aa9□□□□□ -0.97
CD44-206ENST00000415148 TP53I3Q53FA7 332 aa9□□□□□ -0.97
CD44-206ENST00000415148 ULK3Q6PHR2 472 aa9□□□□□ -0.97
CD44-206ENST00000415148 FIGNL1Q6PIW4 674 aa9□□□□□ -0.97
CD44-206ENST00000415148 SEZ6L2Q6UXD5 910 aa9□□□□□ -0.97
CD44-206ENST00000415148 ZNF550Q7Z398 422 aa9□□□□□ -0.97
CD44-206ENST00000415148 FTMTQ8N4E7 242 aa9□□□□□ -0.97
CD44-206ENST00000415148 OR52E2Q8NGJ4 325 aa9□□□□□ -0.97
CD44-206ENST00000415148 ZCCHC10Q8TBK6 192 aa9□□□□□ -0.97
CD44-206ENST00000415148 RPS4Y2Q8TD47 263 aa9□□□□□ -0.97
CD44-206ENST00000415148 C15orf40Q8WUR7 153 aa9□□□□□ -0.97
CD44-206ENST00000415148 SNX33Q8WV41 574 aa9□□□□□ -0.97
CD44-206ENST00000415148 RIT1Q92963 219 aa9□□□□□ -0.97
CD44-206ENST00000415148 PAWRQ96IZ0 340 aaKnown RBP9□□□□□ -0.97
CD44-206ENST00000415148 DMRTA2Q96SC8 542 aa9□□□□□ -0.97
CD44-206ENST00000415148 SEC22CQ9BRL7 303 aa9□□□□□ -0.97
CD44-206ENST00000415148 FKRPQ9H9S5 495 aa9□□□□□ -0.97
CD44-206ENST00000415148 FGF22Q9HCT0 170 aa9□□□□□ -0.97
CD44-206ENST00000415148 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9□□□□□ -0.97
CD44-206ENST00000415148 ANKRD10Q9NXR5 420 aa9□□□□□ -0.97
CD44-206ENST00000415148 AK6Q9Y3D8 172 aaKnown RBP9□□□□□ -0.97
CD44-206ENST00000415148 LINC01553A4QN01 128 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 POM121CA8CG34 1229 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 GABARAPH6UMI1 98 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 IMPA2O14732 288 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 FGF17O60258 216 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 TFP02787 698 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 RRASP10301 218 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ATF4P18848 351 aaPredicted RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 SRMP19623 302 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 CXCL2P19875 107 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 MAT2AP31153 395 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 PTGS2P35354 604 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 GDNFP39905 211 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 DIO1P49895 249 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 CCR9P51686 369 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ALG10BQ5I7T1 473 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 SFRP5Q5T4F7 317 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 METTL11BQ5VVY1 283 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 TANGO2Q6ICL3 276 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 DPY19L2P2Q6ZN68 376 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 SERPINA12Q8IW75 414 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 CMTM4Q8IZR5 234 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ZBTB44Q8NCP5 570 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 OR11G2Q8NGC1 345 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 OR51L1Q8NGJ5 315 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ZNF671Q8TAW3 534 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 CNOT9Q92600 299 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 RERGQ96A58 199 aaPredicted RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 LCORQ96JN0 433 aaPredicted RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 CXorf58Q96LI9 332 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 KLHL15Q96M94 604 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 DERL3Q96Q80 235 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ZFYVE21Q9BQ24 234 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 REG4Q9BYZ8 158 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ZNF436Q9C0F3 470 aaPredicted RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 OR10A4Q9H209 315 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 USP36Q9P275 1121 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 ENTPD2Q9Y5L3 495 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 COL4A2P08572 1712 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 TSPAN4O14817 238 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 LDB3O75112 727 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 PPM1BO75688 479 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 EML2O95834 649 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 PROS1P07225 676 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 HOXD4P09016 255 aaPredicted RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 HIST1H1CP16403 213 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 NAGAP17050 411 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 PSMB1P20618 241 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 EDNRAP25101 427 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 RAD52P43351 418 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 TNFRSF4P43489 277 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 VEGFCP49767 419 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 GPR143P51810 404 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 BLVRAP53004 296 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 RPS15P62841 145 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 IL10RAQ13651 578 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 TCEA2Q15560 299 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 OR6V1Q8N148 313 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 GRHL3Q8TE85 626 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 ZNRF4Q8WWF5 429 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 PMEPA1Q969W9 287 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 GFI1Q99684 422 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 LMF2Q9BU23 707 aaKnown RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 C20orf85Q9H1P6 137 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 MKKSQ9NPJ1 570 aaPredicted RBP8.99□□□□□ -0.97
CD44-206ENST00000415148 UBQLN2Q9UHD9 624 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 FBXL3Q9UKT7 428 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 KCNMB2Q9Y691 235 aa8.99□□□□□ -0.97
CD44-206ENST00000415148 EML5Q05BV3 1969 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TBC1D3DA0A087WVF3 549 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TBC1D3IA0A087WXS9 549 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 A0A1B0GUH1 482 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 A0A1W2PPL8 197 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TBC1D3LB9A6J9 549 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 AIPO00170 330 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 LGALS8O00214 317 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ARPC3O15145 178 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms