RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PRF1P14222 555 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 IL32P24001 234 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 RPS5P46782 204 aaKnown RBP13.07□□□□□ -0.32
CHD1-202ENST00000414220 SELENOWP63302 87 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 CYBRD1Q53TN4 286 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 FAM69AQ5T7M9 428 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 TTC33Q6PID6 262 aaPredicted RBP13.07□□□□□ -0.32
CHD1-202ENST00000414220 C16orf89Q6UX73 402 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 TFAP2EQ6VUC0 442 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 GPAT4Q86UL3 456 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 CCDC103Q8IW40 242 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 UBE2J2Q8N2K1 259 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 C10orf53Q8N6V4 93 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 GPR32P1Q8NGA4 272 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 OR6T1Q8NGN1 323 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 OR6S1Q8NH40 331 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 ZNF775Q96BV0 537 aaPredicted RBP13.07□□□□□ -0.32
CHD1-202ENST00000414220 TPD52L3Q96J77 140 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 MPP4Q96JB8 637 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 ZNF300Q96RE9 604 aaPredicted RBP13.07□□□□□ -0.32
CHD1-202ENST00000414220 ADA2Q9NZK5 511 aa13.07□□□□□ -0.32
CHD1-202ENST00000414220 AQP7P3A6NL99 342 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
CHD1-202ENST00000414220 A6NNC1 897 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 ZNF716A6NP11 495 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 CHP2O43745 196 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 NPIPB7O75200 414 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 PSMB1P20618 241 aaKnown RBP13.06□□□□□ -0.32
CHD1-202ENST00000414220 GSK3BP49841 420 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 CDH12P55289 794 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 TAS2R41P59536 307 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 C8orf82Q6P1X6 216 aaPredicted RBP13.06□□□□□ -0.32
CHD1-202ENST00000414220 Q6ZT83 130 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 SSX8Q7RTT4 187 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 CARM1Q86X55 608 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 TMEM99Q8N816 258 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 ADAMTS16Q8TE57 1224 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 KISS1RQ969F8 398 aaPredicted RBP13.06□□□□□ -0.32
CHD1-202ENST00000414220 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 ASPNQ9BXN1 380 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
CHD1-202ENST00000414220 NGBQ9NPG2 151 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 ADAM21Q9UKJ8 722 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 CORINQ9Y5Q5 1042 aa13.06□□□□□ -0.32
CHD1-202ENST00000414220 SETXQ7Z333 2677 aaKnown RBP13.06□□□□□ -0.32
CHD1-202ENST00000414220 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 NME4O00746 187 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 AKAP8O43823 692 aaKnown RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 ADAP00813 363 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 NQO1P15559 274 aaKnown RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 ZNF43P17038 809 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 IL1RL1Q01638 556 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 ITGADQ13349 1161 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 C1DQ13901 141 aaKnown RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 KRT72Q14CN4 511 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 SFRP5Q5T4F7 317 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 FBXW9Q5XUX1 488 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 CASP12Q6UXS9 341 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 STAC2Q6ZMT1 411 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 DEF8Q6ZN54 512 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 FKBP9P1Q75LS8 142 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 AAED1Q7RTV5 226 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 ABHD12BQ7Z5M8 362 aaPredicted RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 COMTD1Q86VU5 262 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 KTI12Q96EK9 354 aaPredicted RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 LURAP1Q96LR2 239 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 WFIKKN1Q96NZ8 548 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 PCDHAC1Q9H158 963 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 CLEC4MQ9H2X3 399 aaPredicted RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 RASSF1Q9NS23 344 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 ABCD2Q9UBJ2 740 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 RPS6KA6Q9UK32 745 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 ING1Q9UK53 422 aaPredicted RBP13.05□□□□□ -0.32
CHD1-202ENST00000414220 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 TESMINQ9Y4I5 508 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 PKDREJQ9NTG1 2253 aa13.05□□□□□ -0.32
CHD1-202ENST00000414220 TPST2O60704 377 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 CTAG2O75638 210 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 KRT33AO76009 404 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 OR5F1O95221 314 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 OR6A2O95222 327 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 ZNF682O95780 498 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 MT-ATP6P00846 226 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 HIST1H2ABP04908 130 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 IFNW1P05000 195 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 THRBP10828 461 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 KLK2P20151 261 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 EGR4Q05215 589 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 NPTX1Q15818 432 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 H1FNTQ75WM6 255 aaPredicted RBP13.04□□□□□ -0.32
CHD1-202ENST00000414220 HIST3H2AQ7L7L0 130 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 CXorf67Q86X51 503 aaPredicted RBP13.04□□□□□ -0.32
CHD1-202ENST00000414220 PGAM4Q8N0Y7 254 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 GABRG1Q8N1C3 465 aa13.04□□□□□ -0.32
CHD1-202ENST00000414220 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms