RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SEC61A2Q9H9S3 476 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 NOP53Q9NZM5 478 aaKnown RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 LGI1O95970 557 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 IGKV3-15P01624 115 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 CHRM4P08173 479 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 CECR9P0C854 216 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 ITGA2P17301 1181 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 CALCRP30988 508 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 KHKP50053 298 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 IDH3GP51553 393 aaPredicted RBP10.55□□□□□ -0.72
LIMS2-210ENST00000413578 HGFACQ04756 655 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 RUNX1T1Q06455 604 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 EPS8Q12929 822 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 RIN1Q13671 783 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 CASP8Q14790 479 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 CARTPTQ16568 116 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 AAED1Q7RTV5 226 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 SPATA19Q7Z5L4 167 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 ANKRD46Q86W74 232 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 NUP37Q8NFH4 326 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 AURKBQ96GD4 344 aaPredicted RBP10.55□□□□□ -0.72
LIMS2-210ENST00000413578 ZIM3Q96PE6 472 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 TRNT1Q96Q11 434 aaKnown RBP10.55□□□□□ -0.72
LIMS2-210ENST00000413578 DOK1Q99704 481 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 ZNF442Q9H7R0 627 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 TMEM45AQ9NWC5 275 aa10.55□□□□□ -0.72
LIMS2-210ENST00000413578 TMEM129A0AVI4 362 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 CFAP73A6NFT4 308 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 AKR7A3O95154 331 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 CRYAAP02489 173 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 GPIP06744 558 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 CDH2P19022 906 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 SELENOPP49908 381 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 CHN2P52757 468 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 CDH15P55291 814 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 LGALS3BPQ08380 585 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 CEACAM7Q14002 265 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 SYPL1Q16563 259 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 MRPL2Q5T653 305 aaKnown RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 DEF8Q6ZN54 512 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 LRRC74BQ6ZQY2 392 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 ABHD12BQ7Z5M8 362 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 MYPOPQ86VE0 399 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 EPHX4Q8IUS5 362 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 ZNF786Q8N393 782 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 ANKFN1Q8N957 763 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 LINC01356Q8N9X3 169 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 SEMA6DQ8NFY4 1073 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 OR4F15Q8NGB8 312 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 UBLCP1Q8WVY7 318 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 ALKBH3Q96Q83 286 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 RAB1BQ9H0U4 201 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 FBXO9Q9UK97 447 aaPredicted RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 PRDM4Q9UKN5 801 aa10.54□□□□□ -0.72
LIMS2-210ENST00000413578 HEATR1Q9H583 2144 aaKnown RBP10.54□□□□□ -0.72
LIMS2-210ENST00000413578 MEGF8Q7Z7M0 2845 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 ZNF587BE7ETH6 402 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 NR5A2O00482 541 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 FRS3O43559 492 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 NPIPB7O75200 414 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 UPK3AO75631 287 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 VAMP5O95183 116 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 CPSF4O95639 269 aaKnown RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 NUDT17P0C025 328 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 DAOP14920 347 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 CFPP27918 469 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 ACAA2P42765 397 aaKnown RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 ETV4P43268 484 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 TUBA1BP68363 451 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 TUBA4AP68366 448 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 POU3F1Q03052 451 aaPredicted RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 OR7A5Q15622 319 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 MAPK11Q15759 364 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 GSTA3Q16772 222 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 GPAT3Q53EU6 434 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 ANXA8L1Q5VT79 327 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 CREB3L2Q70SY1 520 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 TUBA1AQ71U36 451 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 TCP10LQ8TDR4 215 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 NEU4Q8WWR8 484 aaPredicted RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 CCDC115Q96NT0 180 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 SLC35A5Q9BS91 424 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 PLA2G12AQ9BZM1 189 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 LINC00470Q9BZP3 86 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 AKTIPQ9H8T0 292 aa10.53□□□□□ -0.72
LIMS2-210ENST00000413578 MOV10Q9HCE1 1003 aaKnown RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 MARCOQ9UEW3 520 aaPredicted RBP10.53□□□□□ -0.72
LIMS2-210ENST00000413578 IGHV2OR16-5A0A0B4J2B6 119 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 TMEM229AB2RXF0 380 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 RPL36A-HNRNPH2H7BZ11 118 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 hCG_2039718K7EN88 272 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 FZD7O75084 574 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 ZNF432O94892 652 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 VENTXO95231 258 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 BPGMP07738 259 aa10.52□□□□□ -0.73
LIMS2-210ENST00000413578 CELA3BP08861 270 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms