RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 LCTP09848 1927 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 STRCQ7RTU9 1775 aa-2.05□□□□□ -2.74
RNU4-88P-201ENST00000411220 CICQ96RK0 1608 aaPredicted RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CADPSQ9ULU8 1353 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 A0A088AWK7 358 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 LOC102724200A0A096LPH7 203 aaPredicted RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRAV22A0A0B4J277 110 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRBV5-4A0A0C4DH59 114 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRAPPC13A5PLN9 417 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 LRRC14BA6NHZ5 514 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 F5H5T6 163 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 F6UB75 175 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 RASGRF2O14827 1237 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 INE1O15225 51 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CCL25O15444 150 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 AP5Z1O43299 807 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 OPA1O60313 960 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAD1O60671 282 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 PEX14O75381 377 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 PRKRAO75569 313 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 RPS6KA5O75582 802 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 GATBO75879 557 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CNTN5O94779 1100 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MBD4O95243 580 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TRUB2O95900 331 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MT-CO1P00395 513 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MOSP00540 346 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 LIPFP07098 398 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 IGHV1-8P0DP01 117 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ALPPL2P10696 532 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 IRF2P14316 349 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 IFNAR1P17181 557 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 RPL35AP18077 110 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 NCF2P19878 526 aaPredicted RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SPRR1BP22528 89 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 IGFBP5P24593 272 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 HRH2P25021 359 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 PTBP1P26599 531 aaKnown RBP eCLIP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 LSP1P33241 339 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 EPHX2P34913 555 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF93P35789 620 aaPredicted RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 DDOSTP39656 456 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC1A6P48664 564 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 AGTR2P50052 363 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 P2RX1P51575 399 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CNN1P51911 297 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 RAD23AP54725 363 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CLDN20P56880 219 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 EIF4A1P60842 406 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 PPP1CBP62140 327 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 HDLBPQ00341 1268 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 IFFO1Q0D2I5 559 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ENDOGQ14249 297 aaKnown RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 COG2Q14746 738 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC10A1Q14973 349 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MORF4L2Q15014 288 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MEA1Q16626 185 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 DCAF4L1Q3SXM0 396 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZACNQ401N2 412 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMEM52BQ4KMG9 183 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 LINC01620Q4KN68 170 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM78AQ5JUQ0 283 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 C1orf141Q5JVX7 400 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 FAM209AQ5JX71 171 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 WDR45BQ5MNZ6 344 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TAF3Q5VWG9 929 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR2A2Q6IF42 318 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ERAP2Q6P179 960 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 BRAT1Q6PJG6 821 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 DLEU7Q6UYE1 221 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC36A4Q6YBV0 504 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TMPRSS11BQ86T26 416 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 C14orf37Q86TY3 774 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 UNC93AQ86WB7 457 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MAP7D3Q8IWC1 876 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 FOXRED2Q8IWF2 684 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 METTL25Q8N6Q8 603 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CLDN22Q8N7P3 220 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC43A3Q8NBI5 491 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF740Q8NDX6 193 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CIRBP-AS1Q8TBR5 109 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC2A14Q8TDB8 520 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 BPIFB1Q8TDL5 484 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SLC38A5Q8WUX1 472 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SELENOMQ8WWX9 145 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 OR1E3Q8WZA6 343 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 UCN3Q969E3 161 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SMARCE1Q969G3 411 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ZNF622Q969S3 477 aaKnown RBP eCLIP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ASB9Q96DX5 294 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 AKR1E2Q96JD6 320 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 AMELXQ99217 191 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 PRR15LQ9BU68 103 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 FTOQ9C0B1 505 aaKnown RBP eCLIP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 TWSG1Q9GZX9 223 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 ALDH8A1Q9H2A2 487 aaPredicted RBP-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 SRMSQ9H3Y6 488 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 KCNK15Q9H427 330 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 CST9LQ9H4G1 147 aa-2.06□□□□□ -2.74
RNU4-88P-201ENST00000411220 MROH8Q9H579 483 aa-2.06□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms